Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 AC006970.2-201ENST00000450065 779 ntBASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 PNMA6B-201ENST00000538162 1200 ntBASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 Z98044.1-201ENST00000632503 1764 ntBASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 AL512353.2-201ENST00000448759 1962 ntBASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDKAL1Q5VV42 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 AC060766.5-201ENST00000590539 871 ntBASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 AC120498.8-201ENST00000614275 531 ntBASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKAL1Q5VV42 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 WIZP1-201ENST00000531444 2299 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 AC097658.1-201ENST00000475555 843 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 MIR4758-201ENST00000577688 71 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 AC083880.1-201ENST00000608266 535 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 AL121829.2-201ENST00000620908 328 ntBASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKAL1Q5VV42 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms