Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 AC130371.2-201ENST00000619443 611 ntBASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A13Q5J8X5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 AC004951.3-201ENST00000418645 1148 ntBASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 AC008040.2-201ENST00000461049 708 ntBASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 SDHAP1-207ENST00000440850 2000 ntBASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A13Q5J8X5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 KRT8P41-201ENST00000533985 1514 ntBASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 AC091390.4-202ENST00000476426 537 ntBASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 AC011298.2-201ENST00000617989 482 ntBASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MS4A13Q5J8X5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 Z82202.1-201ENST00000623446 1880 ntBASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 AC087499.1-201ENST00000418141 1075 ntBASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 DGCR10-201ENST00000609839 495 ntBASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
MS4A13Q5J8X5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 MMP23A-201ENST00000234610 1017 ntBASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.9■□□□□ 0.78
MS4A13Q5J8X5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms