Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AC091390.4-202ENST00000476426 537 ntBASIC17.04■□□□□ 0.32
FREM1Q5H8C1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.04■□□□□ 0.32
FREM1Q5H8C1 AC133561.5-201ENST00000635547 218 ntBASIC17.04■□□□□ 0.32
FREM1Q5H8C1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM1Q5H8C1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 TREX1-205ENST00000625293 1783 ntBASIC17.02■□□□□ 0.32
FREM1Q5H8C1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
FREM1Q5H8C1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 RN7SL850P-201ENST00000579959 291 ntBASIC17.02■□□□□ 0.31
FREM1Q5H8C1 AC131212.4-201ENST00000623606 975 ntBASIC17.02■□□□□ 0.31
FREM1Q5H8C1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.02■□□□□ 0.31
FREM1Q5H8C1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 AL160286.2-201ENST00000567150 934 ntBASIC17.01■□□□□ 0.31
FREM1Q5H8C1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 AC096733.2-201ENST00000609937 1394 ntBASIC17.01■□□□□ 0.31
FREM1Q5H8C1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 DGCR10-201ENST00000609839 495 ntBASIC17.01■□□□□ 0.31
FREM1Q5H8C1 AC097493.4-201ENST00000641197 219 ntBASIC17.01■□□□□ 0.31
FREM1Q5H8C1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM1Q5H8C1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
FREM1Q5H8C1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17■□□□□ 0.31
FREM1Q5H8C1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17■□□□□ 0.31
FREM1Q5H8C1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
FREM1Q5H8C1 AC004980.1-204ENST00000429707 299 ntBASIC17■□□□□ 0.31
FREM1Q5H8C1 FAM207BP-201ENST00000447172 505 ntBASIC17■□□□□ 0.31
FREM1Q5H8C1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17■□□□□ 0.31
FREM1Q5H8C1 AP000525.1-201ENST00000608286 694 ntBASIC17■□□□□ 0.31
FREM1Q5H8C1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17■□□□□ 0.31
FREM1Q5H8C1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17■□□□□ 0.31
FREM1Q5H8C1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FREM1Q5H8C1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17■□□□□ 0.31
FREM1Q5H8C1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FREM1Q5H8C1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17■□□□□ 0.31
FREM1Q5H8C1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
FREM1Q5H8C1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.99■□□□□ 0.31
FREM1Q5H8C1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.99■□□□□ 0.31
FREM1Q5H8C1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM1Q5H8C1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM1Q5H8C1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms