Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 AP003097.1-201ENST00000530657 1135 ntBASIC18.47■□□□□ 0.55
SPIN4Q56A73 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.47■□□□□ 0.55
SPIN4Q56A73 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPIN4Q56A73 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 RNA5SP413-201ENST00000516373 109 ntBASIC18.46■□□□□ 0.55
SPIN4Q56A73 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 AC008403.3-201ENST00000598924 454 ntBASIC18.46■□□□□ 0.55
SPIN4Q56A73 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
SPIN4Q56A73 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPIN4Q56A73 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.46■□□□□ 0.54
SPIN4Q56A73 SDHAP1-207ENST00000440850 2000 ntBASIC18.45■□□□□ 0.54
SPIN4Q56A73 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 KRT17P3-201ENST00000420566 1262 ntBASIC18.45■□□□□ 0.54
SPIN4Q56A73 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPIN4Q56A73 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SPIN4Q56A73 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 AL161938.1-201ENST00000569833 2180 ntBASIC18.44■□□□□ 0.54
SPIN4Q56A73 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SPIN4Q56A73 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPIN4Q56A73 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPIN4Q56A73 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.43■□□□□ 0.54
SPIN4Q56A73 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SPIN4Q56A73 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SPIN4Q56A73 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms