Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATP6AP1LQ52LC2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 AL137784.2-201ENST00000607332 1000 ntBASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 AC090340.1-201ENST00000620778 4980 ntBASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6AP1LQ52LC2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 MIPEPP3-201ENST00000412105 444 ntBASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 RAP2CP1-201ENST00000605103 478 ntBASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6AP1LQ52LC2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 AL049812.1-201ENST00000432563 2267 ntBASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 AC006557.6-201ENST00000623071 864 ntBASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6AP1LQ52LC2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6AP1LQ52LC2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP6AP1LQ52LC2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6AP1LQ52LC2 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
ATP6AP1LQ52LC2 AC124283.5-201ENST00000624661 1809 ntBASIC18.65■□□□□ 0.58
ATP6AP1LQ52LC2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms