Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.08■□□□□ 0.81
IRX4P78413 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.08■□□□□ 0.81
IRX4P78413 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.08■□□□□ 0.81
IRX4P78413 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
IRX4P78413 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.08■□□□□ 0.8
IRX4P78413 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.08■□□□□ 0.8
IRX4P78413 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
IRX4P78413 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IRX4P78413 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
IRX4P78413 AL020996.1-203ENST00000536896 2307 ntBASIC20.08■□□□□ 0.8
IRX4P78413 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.08■□□□□ 0.8
IRX4P78413 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
IRX4P78413 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
IRX4P78413 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.07■□□□□ 0.8
IRX4P78413 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
IRX4P78413 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 AL355355.2-201ENST00000442321 338 ntBASIC20.07■□□□□ 0.8
IRX4P78413 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
IRX4P78413 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.07■□□□□ 0.8
IRX4P78413 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IRX4P78413 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.06■□□□□ 0.8
IRX4P78413 AL049597.2-201ENST00000565575 961 ntBASIC20.06■□□□□ 0.8
IRX4P78413 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
IRX4P78413 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.06■□□□□ 0.8
IRX4P78413 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
IRX4P78413 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
IRX4P78413 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
IRX4P78413 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.05■□□□□ 0.8
IRX4P78413 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IRX4P78413 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.05■□□□□ 0.8
IRX4P78413 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.05■□□□□ 0.8
IRX4P78413 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX4P78413 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.05■□□□□ 0.8
IRX4P78413 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.05■□□□□ 0.8
IRX4P78413 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.05■□□□□ 0.8
IRX4P78413 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IRX4P78413 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.04■□□□□ 0.8
IRX4P78413 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms