Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CXCR4P61073 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CXCR4P61073 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CXCR4P61073 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CXCR4P61073 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 AC020763.4-201ENST00000623414 4170 ntBASIC17.63■□□□□ 0.41
CXCR4P61073 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.63■□□□□ 0.41
CXCR4P61073 ZNRF2P3-201ENST00000424200 374 ntBASIC17.63■□□□□ 0.41
CXCR4P61073 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.63■□□□□ 0.41
CXCR4P61073 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.63■□□□□ 0.41
CXCR4P61073 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CXCR4P61073 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.63■□□□□ 0.41
CXCR4P61073 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCR4P61073 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCR4P61073 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCR4P61073 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CXCR4P61073 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CXCR4P61073 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 HLA-G-202ENST00000376815 851 ntBASIC17.62■□□□□ 0.41
CXCR4P61073 HLA-G-203ENST00000376818 1127 ntBASIC17.62■□□□□ 0.41
CXCR4P61073 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.62■□□□□ 0.41
CXCR4P61073 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.62■□□□□ 0.41
CXCR4P61073 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.62■□□□□ 0.41
CXCR4P61073 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 AC016405.3-201ENST00000607710 860 ntBASIC17.62■□□□□ 0.41
CXCR4P61073 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCR4P61073 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCR4P61073 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.62■□□□□ 0.41
CXCR4P61073 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCR4P61073 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.61■□□□□ 0.41
CXCR4P61073 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 AL162412.1-201ENST00000567129 965 ntBASIC17.61■□□□□ 0.41
CXCR4P61073 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.61■□□□□ 0.41
CXCR4P61073 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CXCR4P61073 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.61■□□□□ 0.41
CXCR4P61073 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CXCR4P61073 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CXCR4P61073 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CXCR4P61073 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCR4P61073 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.6■□□□□ 0.41
CXCR4P61073 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.6■□□□□ 0.41
CXCR4P61073 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CXCR4P61073 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCR4P61073 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCR4P61073 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CXCR4P61073 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.59■□□□□ 0.41
CXCR4P61073 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms