Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 AL158211.5-201ENST00000623583 2518 ntBASIC17.72■□□□□ 0.43
CLDN20P56880 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 AC125437.2-201ENST00000625180 2167 ntBASIC17.72■□□□□ 0.43
CLDN20P56880 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN20P56880 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN20P56880 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN20P56880 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 AC008550.1-201ENST00000511500 884 ntBASIC17.72■□□□□ 0.43
CLDN20P56880 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN20P56880 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN20P56880 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.72■□□□□ 0.43
CLDN20P56880 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN20P56880 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN20P56880 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN20P56880 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN20P56880 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN20P56880 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN20P56880 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN20P56880 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN20P56880 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLDN20P56880 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN20P56880 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLDN20P56880 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN20P56880 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN20P56880 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN20P56880 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CLDN20P56880 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN20P56880 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN20P56880 AP001271.2-201ENST00000624018 1556 ntBASIC17.7■□□□□ 0.42
CLDN20P56880 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN20P56880 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLDN20P56880 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN20P56880 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms