Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
WNT3P56703 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
WNT3P56703 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.3■□□□□ 0.52
WNT3P56703 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.3■□□□□ 0.52
WNT3P56703 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.3■□□□□ 0.52
WNT3P56703 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.3■□□□□ 0.52
WNT3P56703 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.3■□□□□ 0.52
WNT3P56703 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
WNT3P56703 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3P56703 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3P56703 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.29■□□□□ 0.52
WNT3P56703 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3P56703 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3P56703 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 AC128676.1-201ENST00000454392 318 ntBASIC18.29■□□□□ 0.52
WNT3P56703 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
WNT3P56703 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.29■□□□□ 0.52
WNT3P56703 KRT18P16-201ENST00000510337 1294 ntBASIC18.29■□□□□ 0.52
WNT3P56703 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.29■□□□□ 0.52
WNT3P56703 AP003097.1-201ENST00000530657 1135 ntBASIC18.29■□□□□ 0.52
WNT3P56703 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3P56703 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3P56703 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.29■□□□□ 0.52
WNT3P56703 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3P56703 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3P56703 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
WNT3P56703 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3P56703 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3P56703 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3P56703 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.28■□□□□ 0.52
WNT3P56703 AC026366.1-201ENST00000488803 879 ntBASIC18.28■□□□□ 0.52
WNT3P56703 AC093827.2-201ENST00000512654 315 ntBASIC18.28■□□□□ 0.52
WNT3P56703 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
WNT3P56703 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3P56703 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 FP475955.4-201ENST00000623131 1990 ntBASIC18.28■□□□□ 0.52
WNT3P56703 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3P56703 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3P56703 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
WNT3P56703 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.27■□□□□ 0.52
WNT3P56703 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3P56703 AL158047.1-201ENST00000445918 881 ntBASIC18.27■□□□□ 0.52
WNT3P56703 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
WNT3P56703 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.27■□□□□ 0.52
WNT3P56703 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.27■□□□□ 0.52
WNT3P56703 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms