Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATXN3P54252 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 AC087388.1-201ENST00000571370 1112 ntBASIC19.71■□□□□ 0.75
ATXN3P54252 CR392000.1-201ENST00000624770 1228 ntBASIC19.71■□□□□ 0.75
ATXN3P54252 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
ATXN3P54252 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ATXN3P54252 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATXN3P54252 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATXN3P54252 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.71■□□□□ 0.75
ATXN3P54252 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ATXN3P54252 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.7■□□□□ 0.74
ATXN3P54252 LIN28AP1-201ENST00000429574 405 ntBASIC19.7■□□□□ 0.74
ATXN3P54252 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.7■□□□□ 0.74
ATXN3P54252 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3P54252 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3P54252 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
ATXN3P54252 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATXN3P54252 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.69■□□□□ 0.74
ATXN3P54252 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 TERF1P1-201ENST00000311003 1181 ntBASIC19.69■□□□□ 0.74
ATXN3P54252 AL390955.1-201ENST00000428694 934 ntBASIC19.69■□□□□ 0.74
ATXN3P54252 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.69■□□□□ 0.74
ATXN3P54252 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATXN3P54252 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
ATXN3P54252 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.69■□□□□ 0.74
ATXN3P54252 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ATXN3P54252 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATXN3P54252 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 AL162377.1-201ENST00000618844 1793 ntBASIC19.68■□□□□ 0.74
ATXN3P54252 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3P54252 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 KSR1P1-201ENST00000446298 240 ntBASIC19.68■□□□□ 0.74
ATXN3P54252 ATP5G1P1-201ENST00000448724 379 ntBASIC19.68■□□□□ 0.74
ATXN3P54252 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3P54252 FITM1-202ENST00000559294 800 ntBASIC19.68■□□□□ 0.74
ATXN3P54252 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.68■□□□□ 0.74
ATXN3P54252 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3P54252 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ATXN3P54252 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
ATXN3P54252 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATXN3P54252 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.68■□□□□ 0.74
ATXN3P54252 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms