Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCN4P51793 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN4P51793 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
CLCN4P51793 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CLCN4P51793 AL359075.1-203ENST00000462729 1002 ntBASIC20.37■□□□□ 0.85
CLCN4P51793 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCN4P51793 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CLCN4P51793 KRT18P56-201ENST00000507275 550 ntBASIC20.37■□□□□ 0.85
CLCN4P51793 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCN4P51793 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN4P51793 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CLCN4P51793 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCN4P51793 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CLCN4P51793 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCN4P51793 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN4P51793 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLCN4P51793 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN4P51793 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCN4P51793 AL671277.2-201ENST00000458060 996 ntBASIC20.36■□□□□ 0.85
CLCN4P51793 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN4P51793 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.36■□□□□ 0.85
CLCN4P51793 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN4P51793 AC008622.2-201ENST00000617006 1229 ntBASIC20.36■□□□□ 0.85
CLCN4P51793 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN4P51793 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN4P51793 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN4P51793 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN4P51793 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 IER3-202ENST00000376377 1350 ntBASIC20.35■□□□□ 0.85
CLCN4P51793 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN4P51793 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN4P51793 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN4P51793 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN4P51793 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.35■□□□□ 0.85
CLCN4P51793 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN4P51793 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN4P51793 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN4P51793 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCN4P51793 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLCN4P51793 AC020907.5-201ENST00000624372 1936 ntBASIC20.35■□□□□ 0.85
CLCN4P51793 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 KRT8P45-201ENST00000414328 1447 ntBASIC20.35■□□□□ 0.85
CLCN4P51793 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN4P51793 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN4P51793 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN4P51793 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN4P51793 AP005212.1-201ENST00000581547 1997 ntBASIC20.34■□□□□ 0.85
CLCN4P51793 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 LINC01521-201ENST00000504184 1943 ntBASIC20.34■□□□□ 0.85
CLCN4P51793 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.34■□□□□ 0.85
CLCN4P51793 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.34■□□□□ 0.85
CLCN4P51793 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.34■□□□□ 0.85
CLCN4P51793 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN4P51793 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CLCN4P51793 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLCN4P51793 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCN4P51793 GABARAPL3-202ENST00000624044 1851 ntBASIC20.34■□□□□ 0.85
CLCN4P51793 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN4P51793 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN4P51793 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN4P51793 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms