Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC1P51610 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.9■□□□□ 0.3
HCFC1P51610 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HCFC1P51610 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
HCFC1P51610 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HCFC1P51610 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC1P51610 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC1P51610 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC1P51610 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC1P51610 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HCFC1P51610 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC1P51610 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC1P51610 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC1P51610 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC1P51610 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC1P51610 KRT126P-201ENST00000549467 1181 ntBASIC16.88■□□□□ 0.29
HCFC1P51610 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC1P51610 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
HCFC1P51610 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC1P51610 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.87■□□□□ 0.29
HCFC1P51610 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
HCFC1P51610 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 KRT18P38-201ENST00000449496 1282 ntBASIC16.87■□□□□ 0.29
HCFC1P51610 ZNF444P1-201ENST00000559497 298 ntBASIC16.87■□□□□ 0.29
HCFC1P51610 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC1P51610 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.87■□□□□ 0.29
HCFC1P51610 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC1P51610 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HCFC1P51610 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 STARP1-201ENST00000397973 869 ntBASIC16.86■□□□□ 0.29
HCFC1P51610 AL450487.1-201ENST00000426799 995 ntBASIC16.86■□□□□ 0.29
HCFC1P51610 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC1P51610 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC1P51610 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC1P51610 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.86■□□□□ 0.29
HCFC1P51610 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.86■□□□□ 0.29
HCFC1P51610 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.86■□□□□ 0.29
HCFC1P51610 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HCFC1P51610 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCFC1P51610 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.86■□□□□ 0.29
HCFC1P51610 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC1P51610 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC1P51610 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.85■□□□□ 0.29
HCFC1P51610 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 AL391422.3-201ENST00000603791 2761 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms