Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC9A3P48764 AL032819.2-201ENST00000624543 2162 ntBASIC17.72■□□□□ 0.43
SLC9A3P48764 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SLC9A3P48764 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SLC9A3P48764 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC9A3P48764 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 RAP2CP1-201ENST00000605103 478 ntBASIC17.71■□□□□ 0.43
SLC9A3P48764 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC9A3P48764 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC9A3P48764 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
SLC9A3P48764 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC9A3P48764 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC9A3P48764 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC9A3P48764 TFP1-202ENST00000475455 1573 ntBASIC17.7■□□□□ 0.42
SLC9A3P48764 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC9A3P48764 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC9A3P48764 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC9A3P48764 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC9A3P48764 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC9A3P48764 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC9A3P48764 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC9A3P48764 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC9A3P48764 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
SLC9A3P48764 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC9A3P48764 AL121832.2-201ENST00000610979 668 ntBASIC17.7■□□□□ 0.42
SLC9A3P48764 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC9A3P48764 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 AL138781.2-201ENST00000617896 1843 ntBASIC17.7■□□□□ 0.42
SLC9A3P48764 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC9A3P48764 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 MIPEPP3-201ENST00000412105 444 ntBASIC17.69■□□□□ 0.42
SLC9A3P48764 CROCCP5-201ENST00000436658 830 ntBASIC17.69■□□□□ 0.42
SLC9A3P48764 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC9A3P48764 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC9A3P48764 AC092118.2-201ENST00000613495 667 ntBASIC17.69■□□□□ 0.42
SLC9A3P48764 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC9A3P48764 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC9A3P48764 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC9A3P48764 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC9A3P48764 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC9A3P48764 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC9A3P48764 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SLC9A3P48764 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC9A3P48764 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms