Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 MTF2-208ENST00000476037 788 ntTSL 54.31□□□□□ -1.721e-7■■■■□ 20.2
MATR3P43243 MTF2-212ENST00000497976 760 ntTSL 54.14□□□□□ -1.751e-7■■■■□ 20.2
MATR3P43243 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.272e-6■■■■□ 20.2
MATR3P43243 PLCL1-202ENST00000435320 6665 ntTSL 221.7■■□□□ 1.062e-6■■■■□ 20.2
MATR3P43243 PLCL1-205ENST00000487695 3083 ntTSL 57.78□□□□□ -1.162e-6■■■■□ 20.2
MATR3P43243 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.966e-7■■■■□ 20.2
MATR3P43243 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.146e-7■■■■□ 20.2
MATR3P43243 MLLT10-206ENST00000420525 538 ntTSL 32.45□□□□□ -2.024e-7■■■■□ 20.2
MATR3P43243 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.34■□□□□ 0.858e-7■■■■□ 20.2
MATR3P43243 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.498e-7■■■■□ 20.2
MATR3P43243 C1GALT1-204ENST00000429911 802 ntTSL 512.37□□□□□ -0.432e-7■■■■□ 20.2
MATR3P43243 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC14.62□□□□□ -0.077e-7■■■■□ 20.2
MATR3P43243 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC13.79□□□□□ -0.27e-7■■■■□ 20.2
MATR3P43243 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.617e-7■■■■□ 20.2
MATR3P43243 G2E3-203ENST00000544007 1003 ntTSL 24.38□□□□□ -1.717e-7■■■■□ 20.2
MATR3P43243 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.922e-6■■■■□ 20.2
MATR3P43243 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.872e-6■■■■□ 20.2
MATR3P43243 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.39■□□□□ 0.542e-6■■■■□ 20.2
MATR3P43243 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.321e-6■■■■□ 20.2
MATR3P43243 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.09□□□□□ -1.441e-6■■■■□ 20.2
MATR3P43243 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.531e-6■■■■□ 20.2
MATR3P43243 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.37□□□□□ -1.551e-6■■■■□ 20.2
MATR3P43243 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.561e-6■■■■□ 20.2
MATR3P43243 KLC4-206ENST00000460283 550 ntTSL 421.98■■□□□ 1.113e-8■■■■□ 20.2
MATR3P43243 KLC4-217ENST00000481499 1465 ntTSL 420.13■□□□□ 0.813e-8■■■■□ 20.2
MATR3P43243 KLC4-218ENST00000481888 549 ntTSL 218.76■□□□□ 0.591e-11■■■■□ 20.2
MATR3P43243 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.513e-8■■■■□ 20.2
MATR3P43243 KLC4-212ENST00000470728 872 ntTSL 517.23■□□□□ 0.353e-8■■■■□ 20.2
MATR3P43243 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.68■□□□□ 0.263e-8■■■■□ 20.2
MATR3P43243 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.32■□□□□ 0.23e-8■■■■□ 20.2
MATR3P43243 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.023e-8■■■■□ 20.2
MATR3P43243 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.143e-8■■■■□ 20.2
MATR3P43243 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.343e-8■■■■□ 20.2
MATR3P43243 KLC4-216ENST00000479632 528 ntTSL 412.28□□□□□ -0.443e-8■■■■□ 20.2
MATR3P43243 KLC4-209ENST00000467906 3604 ntTSL 211.06□□□□□ -0.643e-8■■■■□ 20.2
MATR3P43243 KLC4-214ENST00000472792 577 ntTSL 310.44□□□□□ -0.743e-8■■■■□ 20.2
MATR3P43243 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.431e-8■■■■□ 20.2
MATR3P43243 REV1-203ENST00000413697 4727 ntTSL 222.37■■□□□ 1.171e-8■■■■□ 20.2
MATR3P43243 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-8■■■■□ 20.2
MATR3P43243 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.821e-6■■■■□ 20.2
MATR3P43243 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.12■■□□□ 1.612e-6■■■■□ 20.2
MATR3P43243 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.612e-6■■■■□ 20.2
MATR3P43243 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.612e-6■■■■□ 20.2
MATR3P43243 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.552e-6■■■■□ 20.2
MATR3P43243 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.52e-6■■■■□ 20.2
MATR3P43243 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.52e-6■■■■□ 20.2
MATR3P43243 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.452e-6■■■■□ 20.2
MATR3P43243 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.452e-6■■■■□ 20.2
MATR3P43243 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.976e-7■■■■□ 20.2
MATR3P43243 TAL1-204ENST00000464796 237 ntTSL 1 (best)9.58□□□□□ -0.886e-7■■■■□ 20.2
MATR3P43243 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 04e-7■■■■□ 20.1
MATR3P43243 SMARCB1-205ENST00000417137 889 ntTSL 325.3■■□□□ 1.645e-9■■■■□ 20.1
MATR3P43243 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.575e-9■■■■□ 20.1
MATR3P43243 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.84■■□□□ 1.255e-9■■■■□ 20.1
MATR3P43243 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.965e-9■■■■□ 20.1
MATR3P43243 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.79□□□□□ -0.25e-9■■■■□ 20.1
MATR3P43243 SMARCB1-208ENST00000634926 269 ntTSL 1 (best)2.4□□□□□ -2.035e-9■■■■□ 20.1
MATR3P43243 SMARCB1-209ENST00000635578 242 ntTSL 1 (best)1.08□□□□□ -2.245e-9■■■■□ 20.1
MATR3P43243 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.239e-7■■■■□ 20.1
MATR3P43243 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.989e-7■■■■□ 20.1
MATR3P43243 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.79e-7■■■■□ 20.1
MATR3P43243 ZNF609-203ENST00000558680 418 ntTSL 39.8□□□□□ -0.842e-7■■■■□ 20.1
MATR3P43243 SENP6-206ENST00000474906 802 ntTSL 34.54□□□□□ -1.689e-7■■■■□ 20.1
MATR3P43243 ITCH-205ENST00000483727 1070 ntTSL 53.1□□□□□ -1.914e-8■■■■□ 20.1
MATR3P43243 SENP6-212ENST00000503501 2041 ntTSL 20.23□□□□□ -2.379e-7■■■■□ 20.1
MATR3P43243 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.74■■□□□ 1.873e-10■■■■□ 20.1
MATR3P43243 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.583e-10■■■■□ 20.1
MATR3P43243 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.453e-10■■■■□ 20.1
MATR3P43243 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.52■□□□□ 0.233e-10■■■■□ 20.1
MATR3P43243 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.233e-10■■■■□ 20.1
MATR3P43243 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC13.21□□□□□ -0.293e-10■■■■□ 20.1
MATR3P43243 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.7□□□□□ -1.53e-10■■■■□ 20.1
MATR3P43243 RBPMS-219ENST00000523115 449 ntTSL 33.95□□□□□ -1.783e-10■■■■□ 20.1
MATR3P43243 RBPMS-214ENST00000521816 98 ntTSL 31.65□□□□□ -2.153e-10■■■■□ 20.1
MATR3P43243 PQLC1-214ENST00000593030 764 ntTSL 527.7■■■□□ 2.022e-6■■■■□ 20.1
MATR3P43243 CMC1-202ENST00000396610 593 ntTSL 23.8□□□□□ -1.83e-6■■■■□ 20.1
MATR3P43243 CENPE-203ENST00000503705 3468 ntTSL 29.62□□□□□ -0.872e-6■■■■□ 20.1
MATR3P43243 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.44□□□□□ -1.542e-6■■■■□ 20.1
MATR3P43243 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.19□□□□□ -1.582e-6■■■■□ 20.1
MATR3P43243 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.962e-6■■■■□ 20.1
MATR3P43243 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC9.94□□□□□ -0.821e-6■■■■□ 20.1
MATR3P43243 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.19□□□□□ -1.586e-7■■■■□ 20.1
MATR3P43243 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.3■■□□□ 1.162e-6■■■■□ 20.1
MATR3P43243 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.162e-6■■■■□ 20.1
MATR3P43243 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC12.41□□□□□ -0.421e-6■■■■□ 20.1
MATR3P43243 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.481e-6■■■■□ 20.1
MATR3P43243 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.982e-6■■■■□ 20.1
MATR3P43243 NPSR1-AS1-207ENST00000539747 830 ntTSL 26.09□□□□□ -1.431e-6■■■■□ 20.1
MATR3P43243 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.96□□□□□ -1.461e-6■■■■□ 20.1
MATR3P43243 TMEM164-205ENST00000461715 711 ntTSL 37.63□□□□□ -1.192e-6■■■■□ 20.1
MATR3P43243 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.189e-7■■■■□ 20
MATR3P43243 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.139e-7■■■■□ 20
MATR3P43243 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.139e-7■■■■□ 20
MATR3P43243 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.089e-7■■■■□ 20
MATR3P43243 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.298e-7■■■■□ 20
MATR3P43243 CIR1-202ENST00000377973 561 ntTSL 39.62□□□□□ -0.879e-8■■■■□ 20
MATR3P43243 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.169e-8■■■■□ 20
MATR3P43243 PTTG1IP-206ENST00000480234 398 ntTSL 322.02■■□□□ 1.123e-10■■■■□ 20
MATR3P43243 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.47■□□□□ 0.873e-10■■■■□ 20
MATR3P43243 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.813e-10■■■■□ 20
Retrieved 100 of 16,209 protein–RNA pairs in 64.9 ms