RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-208ENST00000634926 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
SMARCB1-208ENST00000634926 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
SMARCB1-208ENST00000634926 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
SMARCB1-208ENST00000634926 FOXD1Q16676 465 aa16.21■□□□□ 0.19
SMARCB1-208ENST00000634926 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
SMARCB1-208ENST00000634926 MSH5O43196 834 aa15.11■□□□□ 0.01
SMARCB1-208ENST00000634926 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
SMARCB1-208ENST00000634926 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
SMARCB1-208ENST00000634926 ADRA2BP18089 450 aa14.87□□□□□ -0.03
SMARCB1-208ENST00000634926 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
SMARCB1-208ENST00000634926 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
SMARCB1-208ENST00000634926 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
SMARCB1-208ENST00000634926 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
SMARCB1-208ENST00000634926 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-208ENST00000634926 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
SMARCB1-208ENST00000634926 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
SMARCB1-208ENST00000634926 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
SMARCB1-208ENST00000634926 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
SMARCB1-208ENST00000634926 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
SMARCB1-208ENST00000634926 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
SMARCB1-208ENST00000634926 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-208ENST00000634926 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
SMARCB1-208ENST00000634926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.436e-9■□□□□ 8.2
SMARCB1-208ENST00000634926 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
SMARCB1-208ENST00000634926 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
SMARCB1-208ENST00000634926 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
SMARCB1-208ENST00000634926 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
SMARCB1-208ENST00000634926 DSG3P32926 999 aa12.06□□□□□ -0.48
SMARCB1-208ENST00000634926 POTEHQ6S545 545 aa12.02□□□□□ -0.49
SMARCB1-208ENST00000634926 CAPN15O75808 1086 aa11.98□□□□□ -0.49
SMARCB1-208ENST00000634926 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
SMARCB1-208ENST00000634926 KCNA4P22459 653 aa11.79□□□□□ -0.52
SMARCB1-208ENST00000634926 ABCB7O75027 752 aa11.75□□□□□ -0.53
SMARCB1-208ENST00000634926 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
SMARCB1-208ENST00000634926 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
SMARCB1-208ENST00000634926 APLP2Q06481 763 aa11.48□□□□□ -0.57
SMARCB1-208ENST00000634926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-208ENST00000634926 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
SMARCB1-208ENST00000634926 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-208ENST00000634926 POLA2Q14181 598 aa11.36□□□□□ -0.59
SMARCB1-208ENST00000634926 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
SMARCB1-208ENST00000634926 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
SMARCB1-208ENST00000634926 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
SMARCB1-208ENST00000634926 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
SMARCB1-208ENST00000634926 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
SMARCB1-208ENST00000634926 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
SMARCB1-208ENST00000634926 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-208ENST00000634926 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
SMARCB1-208ENST00000634926 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
SMARCB1-208ENST00000634926 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
SMARCB1-208ENST00000634926 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-208ENST00000634926 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
SMARCB1-208ENST00000634926 ZBTB22O15209 634 aa10.92□□□□□ -0.66
SMARCB1-208ENST00000634926 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
SMARCB1-208ENST00000634926 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCB1-208ENST00000634926 EVX2Q03828 476 aa10.91□□□□□ -0.66
SMARCB1-208ENST00000634926 HAX1O00165 279 aa10.88□□□□□ -0.67
SMARCB1-208ENST00000634926 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
SMARCB1-208ENST00000634926 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
SMARCB1-208ENST00000634926 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
SMARCB1-208ENST00000634926 SPDYE2Q495Y8 402 aa10.65□□□□□ -0.7
SMARCB1-208ENST00000634926 ATXN8OSP0DMR3 200 aa10.63□□□□□ -0.71
SMARCB1-208ENST00000634926 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-208ENST00000634926 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
SMARCB1-208ENST00000634926 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
SMARCB1-208ENST00000634926 FBLN2P98095 1184 aa10.56□□□□□ -0.72
SMARCB1-208ENST00000634926 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
SMARCB1-208ENST00000634926 SPDYE1Q8NFV5 336 aaPredicted RBP10.53□□□□□ -0.72
SMARCB1-208ENST00000634926 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
SMARCB1-208ENST00000634926 GABBR2O75899 941 aa10.51□□□□□ -0.73
SMARCB1-208ENST00000634926 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-208ENST00000634926 LHX8Q68G74 356 aa10.4□□□□□ -0.74
SMARCB1-208ENST00000634926 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
SMARCB1-208ENST00000634926 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMARCB1-208ENST00000634926 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
SMARCB1-208ENST00000634926 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
SMARCB1-208ENST00000634926 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
SMARCB1-208ENST00000634926 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
SMARCB1-208ENST00000634926 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
SMARCB1-208ENST00000634926 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-208ENST00000634926 ZRANB1Q9UGI0 708 aa10.06□□□□□ -0.8
SMARCB1-208ENST00000634926 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
SMARCB1-208ENST00000634926 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
SMARCB1-208ENST00000634926 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
SMARCB1-208ENST00000634926 CLCN6P51797 869 aa10.01□□□□□ -0.81
SMARCB1-208ENST00000634926 OTUD5Q96G74 571 aa10.01□□□□□ -0.81
SMARCB1-208ENST00000634926 PLSCR2Q9NRY7 297 aa10□□□□□ -0.81
SMARCB1-208ENST00000634926 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
SMARCB1-208ENST00000634926 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.82
SMARCB1-208ENST00000634926 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
SMARCB1-208ENST00000634926 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
SMARCB1-208ENST00000634926 POTEJP0CG39 1038 aa9.87□□□□□ -0.83
SMARCB1-208ENST00000634926 STAG3Q9UJ98 1225 aa9.87□□□□□ -0.83
SMARCB1-208ENST00000634926 POTEMA6NI47 508 aa9.82□□□□□ -0.84
SMARCB1-208ENST00000634926 MS4A3Q96HJ5 214 aa9.81□□□□□ -0.84
SMARCB1-208ENST00000634926 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SMARCB1-208ENST00000634926 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-208ENST00000634926 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-208ENST00000634926 PAK3O75914 559 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms