RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 AEBP2Q6ZN18 517 aaPredicted RBP36.79■■■■□ 3.48
SENP6-206ENST00000474906 CHIC1Q5VXU3 224 aa35.17■■■■□ 3.22
SENP6-206ENST00000474906 SENP3Q9H4L4 574 aaPredicted RBP31.33■■■□□ 2.61
SENP6-206ENST00000474906 PHF23Q9BUL5 403 aaPredicted RBP30.95■■■□□ 2.55
SENP6-206ENST00000474906 FOXD1Q16676 465 aa29.17■■■□□ 2.26
SENP6-206ENST00000474906 PLPPR3Q6T4P5 718 aa28.21■■■□□ 2.11
SENP6-206ENST00000474906 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
SENP6-206ENST00000474906 ADRA2BP18089 450 aa27.39■■□□□ 1.98
SENP6-206ENST00000474906 PIAS4Q8N2W9 510 aaPredicted RBP27.32■■□□□ 1.96
SENP6-206ENST00000474906 MSH5O43196 834 aa27.19■■□□□ 1.94
SENP6-206ENST00000474906 POTEDQ86YR6 584 aa26.12■■□□□ 1.77
SENP6-206ENST00000474906 MAPK8IP2Q13387 824 aaPredicted RBP25.08■■□□□ 1.61
SENP6-206ENST00000474906 SCAF1Q9H7N4 1312 aaKnown RBP25.04■■□□□ 1.6
SENP6-206ENST00000474906 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.58
SENP6-206ENST00000474906 PPP4R3CPQ6ZMV5 832 aa24.76■■□□□ 1.55
SENP6-206ENST00000474906 CNKSR2Q8WXI2 1034 aa24.23■■□□□ 1.47
SENP6-206ENST00000474906 HOXD11P31277 338 aaPredicted RBP24.07■■□□□ 1.44
SENP6-206ENST00000474906 RNF216Q9NWF9 866 aaPredicted RBP23.96■■□□□ 1.43
SENP6-206ENST00000474906 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
SENP6-206ENST00000474906 DCAF8L1A6NGE4 600 aa23.83■■□□□ 1.41
SENP6-206ENST00000474906 NPM3O75607 178 aaKnown RBP23.55■■□□□ 1.36
SENP6-206ENST00000474906 KCNA4P22459 653 aa23.33■■□□□ 1.33
SENP6-206ENST00000474906 RNF39Q9H2S5 420 aa23.23■■□□□ 1.31
SENP6-206ENST00000474906 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
SENP6-206ENST00000474906 CACNB1Q02641 598 aaPredicted RBP23.17■■□□□ 1.3
SENP6-206ENST00000474906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.91■■□□□ 1.261e-6■■□□□ 12.2
SENP6-206ENST00000474906 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
SENP6-206ENST00000474906 U3KPZ7 1027 aaPredicted RBP22.5■■□□□ 1.19
SENP6-206ENST00000474906 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
SENP6-206ENST00000474906 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
SENP6-206ENST00000474906 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
SENP6-206ENST00000474906 CAPN15O75808 1086 aa22.02■■□□□ 1.12
SENP6-206ENST00000474906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
SENP6-206ENST00000474906 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
SENP6-206ENST00000474906 APLP2Q06481 763 aa21.86■■□□□ 1.09
SENP6-206ENST00000474906 DSG3P32926 999 aa21.85■■□□□ 1.09
SENP6-206ENST00000474906 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
SENP6-206ENST00000474906 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
SENP6-206ENST00000474906 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
SENP6-206ENST00000474906 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
SENP6-206ENST00000474906 FOXD4L1Q9NU39 408 aa21.69■■□□□ 1.06
SENP6-206ENST00000474906 ABCB7O75027 752 aa21.53■■□□□ 1.04
SENP6-206ENST00000474906 ZBTB22O15209 634 aa21.46■■□□□ 1.03
SENP6-206ENST00000474906 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
SENP6-206ENST00000474906 POLA2Q14181 598 aa21.2■□□□□ 0.98
SENP6-206ENST00000474906 ATXN8OSP0DMR3 200 aa20.98■□□□□ 0.95
SENP6-206ENST00000474906 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
SENP6-206ENST00000474906 ZBTB12Q9Y330 459 aaPredicted RBP20.79■□□□□ 0.92
SENP6-206ENST00000474906 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
SENP6-206ENST00000474906 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
SENP6-206ENST00000474906 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
SENP6-206ENST00000474906 POTEHQ6S545 545 aa20.51■□□□□ 0.87
SENP6-206ENST00000474906 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
SENP6-206ENST00000474906 FBLN2P98095 1184 aa20.39■□□□□ 0.85
SENP6-206ENST00000474906 MKRN4PQ13434 485 aaPredicted RBP20.3■□□□□ 0.84
SENP6-206ENST00000474906 CHRDL2Q6WN34 429 aa20.28■□□□□ 0.84
SENP6-206ENST00000474906 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
SENP6-206ENST00000474906 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
SENP6-206ENST00000474906 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
SENP6-206ENST00000474906 SPDYE2Q495Y8 402 aa20.18■□□□□ 0.82
SENP6-206ENST00000474906 PITPNM1O00562 1244 aa20.01■□□□□ 0.79
SENP6-206ENST00000474906 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
SENP6-206ENST00000474906 SSUH2Q9Y2M2 353 aa19.95■□□□□ 0.78
SENP6-206ENST00000474906 PIP4P2Q8N4L2 257 aa19.86■□□□□ 0.77
SENP6-206ENST00000474906 FXR2P51116 673 aaKnown RBP eCLIP19.78■□□□□ 0.76
SENP6-206ENST00000474906 SPDYE1Q8NFV5 336 aaPredicted RBP19.76■□□□□ 0.75
SENP6-206ENST00000474906 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
SENP6-206ENST00000474906 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
SENP6-206ENST00000474906 PRKAR2AP13861 404 aaKnown RBP19.48■□□□□ 0.71
SENP6-206ENST00000474906 SPDYE4A6NLX3 237 aa19.45■□□□□ 0.7
SENP6-206ENST00000474906 PRR29P0C7W0 189 aa19.42■□□□□ 0.7
SENP6-206ENST00000474906 HAX1O00165 279 aa19.4■□□□□ 0.7
SENP6-206ENST00000474906 SP7Q8TDD2 431 aaPredicted RBP19.35■□□□□ 0.69
SENP6-206ENST00000474906 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
SENP6-206ENST00000474906 EVX2Q03828 476 aa19.2■□□□□ 0.66
SENP6-206ENST00000474906 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
SENP6-206ENST00000474906 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
SENP6-206ENST00000474906 FARP1Q9Y4F1 1045 aaPredicted RBP19.06■□□□□ 0.64
SENP6-206ENST00000474906 PROM2Q8N271 834 aa19.04■□□□□ 0.64
SENP6-206ENST00000474906 CREBZFQ9NS37 354 aa19.01■□□□□ 0.63
SENP6-206ENST00000474906 CD44P16070 742 aaKnown RBP18.89■□□□□ 0.61
SENP6-206ENST00000474906 GABBR2O75899 941 aa18.78■□□□□ 0.6
SENP6-206ENST00000474906 FKBP8Q14318 412 aa18.75■□□□□ 0.59
SENP6-206ENST00000474906 MNX1P50219 401 aaPredicted RBP18.73■□□□□ 0.59
SENP6-206ENST00000474906 NPM1P06748 294 aaKnown RBP eCLIP18.65■□□□□ 0.58
SENP6-206ENST00000474906 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
SENP6-206ENST00000474906 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
SENP6-206ENST00000474906 CLCN6P51797 869 aa18.56■□□□□ 0.56
SENP6-206ENST00000474906 PAK3O75914 559 aaPredicted RBP18.54■□□□□ 0.56
SENP6-206ENST00000474906 MIER1Q8N108 512 aa18.5■□□□□ 0.55
SENP6-206ENST00000474906 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
SENP6-206ENST00000474906 PHF12Q96QT6 1004 aa18.43■□□□□ 0.54
SENP6-206ENST00000474906 POTEIP0CG38 1075 aa18.4■□□□□ 0.54
SENP6-206ENST00000474906 PLCD3Q8N3E9 789 aa18.4■□□□□ 0.54
SENP6-206ENST00000474906 GALR2O43603 387 aaPredicted RBP18.37■□□□□ 0.53
SENP6-206ENST00000474906 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
SENP6-206ENST00000474906 DCBLD2Q96PD2 775 aa18.32■□□□□ 0.52
SENP6-206ENST00000474906 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
SENP6-206ENST00000474906 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
SENP6-206ENST00000474906 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms