Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.56■□□□□ 0.72
HADHAP40939 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
HADHAP40939 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
HADHAP40939 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.56■□□□□ 0.72
HADHAP40939 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.56■□□□□ 0.72
HADHAP40939 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HADHAP40939 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HADHAP40939 POU5F1P3-201ENST00000428824 1078 ntBASIC19.55■□□□□ 0.72
HADHAP40939 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HADHAP40939 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.55■□□□□ 0.72
HADHAP40939 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.55■□□□□ 0.72
HADHAP40939 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.55■□□□□ 0.72
HADHAP40939 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.55■□□□□ 0.72
HADHAP40939 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 MTDHP1-201ENST00000605323 784 ntBASIC19.55■□□□□ 0.72
HADHAP40939 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.55■□□□□ 0.72
HADHAP40939 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HADHAP40939 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HADHAP40939 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HADHAP40939 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.55■□□□□ 0.72
HADHAP40939 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.54■□□□□ 0.72
HADHAP40939 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 AC006058.3-201ENST00000606217 1069 ntBASIC19.54■□□□□ 0.72
HADHAP40939 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.54■□□□□ 0.72
HADHAP40939 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HADHAP40939 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 AL020996.1-203ENST00000536896 2307 ntBASIC19.53■□□□□ 0.72
HADHAP40939 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 LINC01465-201ENST00000408887 1940 ntBASIC19.53■□□□□ 0.72
HADHAP40939 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HADHAP40939 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HADHAP40939 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HADHAP40939 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.53■□□□□ 0.72
HADHAP40939 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.53■□□□□ 0.72
HADHAP40939 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.53■□□□□ 0.72
HADHAP40939 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.53■□□□□ 0.72
HADHAP40939 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HADHAP40939 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HADHAP40939 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HADHAP40939 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
HADHAP40939 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HADHAP40939 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms