Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 RCN1P1-201ENST00000400413 996 ntBASIC21.05■□□□□ 0.96
RFX1P22670 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.05■□□□□ 0.96
RFX1P22670 YBX1P10-201ENST00000444752 975 ntBASIC21.05■□□□□ 0.96
RFX1P22670 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.05■□□□□ 0.96
RFX1P22670 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.05■□□□□ 0.96
RFX1P22670 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RFX1P22670 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
RFX1P22670 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.05■□□□□ 0.96
RFX1P22670 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RFX1P22670 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFX1P22670 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 AC124283.5-201ENST00000624661 1809 ntBASIC21.04■□□□□ 0.96
RFX1P22670 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.04■□□□□ 0.96
RFX1P22670 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RFX1P22670 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 AC133681.1-201ENST00000465482 601 ntBASIC21.04■□□□□ 0.96
RFX1P22670 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.04■□□□□ 0.96
RFX1P22670 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.04■□□□□ 0.96
RFX1P22670 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.04■□□□□ 0.96
RFX1P22670 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 AC113410.3-201ENST00000623366 203 ntBASIC21.04■□□□□ 0.96
RFX1P22670 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RFX1P22670 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 AC018445.3-201ENST00000624177 1945 ntBASIC21.04■□□□□ 0.96
RFX1P22670 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX1P22670 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX1P22670 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFX1P22670 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX1P22670 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.03■□□□□ 0.96
RFX1P22670 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.03■□□□□ 0.96
RFX1P22670 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.03■□□□□ 0.96
RFX1P22670 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX1P22670 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RFX1P22670 AL032819.2-201ENST00000624543 2162 ntBASIC21.03■□□□□ 0.96
RFX1P22670 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX1P22670 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX1P22670 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX1P22670 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 AL355075.4-201ENST00000554988 638 ntBASIC21.02■□□□□ 0.96
RFX1P22670 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX1P22670 CD177P1-201ENST00000606252 935 ntBASIC21.02■□□□□ 0.96
RFX1P22670 AC120498.8-201ENST00000614275 531 ntBASIC21.02■□□□□ 0.96
RFX1P22670 AL121829.2-201ENST00000620908 328 ntBASIC21.02■□□□□ 0.96
RFX1P22670 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFX1P22670 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFX1P22670 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 AP006587.1-201ENST00000534129 1502 ntBASIC21.02■□□□□ 0.96
RFX1P22670 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX1P22670 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms