Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNAP12004 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCNAP12004 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNAP12004 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNAP12004 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PCNAP12004 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PCNAP12004 UNC93B5-201ENST00000530315 699 ntBASIC18.82■□□□□ 0.6
PCNAP12004 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.82■□□□□ 0.6
PCNAP12004 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.82■□□□□ 0.6
PCNAP12004 AP006587.1-201ENST00000534129 1502 ntBASIC18.82■□□□□ 0.6
PCNAP12004 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNAP12004 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCNAP12004 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCNAP12004 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNAP12004 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCNAP12004 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCNAP12004 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.81■□□□□ 0.6
PCNAP12004 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.81■□□□□ 0.6
PCNAP12004 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCNAP12004 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNAP12004 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCNAP12004 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PCNAP12004 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCNAP12004 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNAP12004 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCNAP12004 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNAP12004 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNAP12004 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNAP12004 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNAP12004 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCNAP12004 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
PCNAP12004 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCNAP12004 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.79■□□□□ 0.6
PCNAP12004 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCNAP12004 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.79■□□□□ 0.6
PCNAP12004 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCNAP12004 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms