Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBCP0CG48 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
UBCP0CG48 AC141586.3-201ENST00000562166 1838 ntBASIC16.96■□□□□ 0.3
UBCP0CG48 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBCP0CG48 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
UBCP0CG48 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UBCP0CG48 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBCP0CG48 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.96■□□□□ 0.3
UBCP0CG48 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBCP0CG48 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.95■□□□□ 0.3
UBCP0CG48 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.95■□□□□ 0.3
UBCP0CG48 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBCP0CG48 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 ZNF815P-204ENST00000434898 1737 ntBASIC16.95■□□□□ 0.3
UBCP0CG48 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBCP0CG48 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
UBCP0CG48 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
UBCP0CG48 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.94■□□□□ 0.3
UBCP0CG48 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.94■□□□□ 0.3
UBCP0CG48 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UBCP0CG48 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBCP0CG48 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.94■□□□□ 0.3
UBCP0CG48 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.94■□□□□ 0.3
UBCP0CG48 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBCP0CG48 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBCP0CG48 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBCP0CG48 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBCP0CG48 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.93■□□□□ 0.3
UBCP0CG48 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UBCP0CG48 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.93■□□□□ 0.3
UBCP0CG48 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
UBCP0CG48 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 RAP2CP1-201ENST00000605103 478 ntBASIC16.93■□□□□ 0.3
UBCP0CG48 AC080038.1-201ENST00000611274 1154 ntBASIC16.93■□□□□ 0.3
UBCP0CG48 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.93■□□□□ 0.3
UBCP0CG48 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.93■□□□□ 0.3
UBCP0CG48 AC073111.5-205ENST00000641717 521 ntBASIC16.93■□□□□ 0.3
UBCP0CG48 AL161938.1-201ENST00000569833 2180 ntBASIC16.93■□□□□ 0.3
UBCP0CG48 TEX21P-204ENST00000641479 1693 ntBASIC16.93■□□□□ 0.3
UBCP0CG48 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBCP0CG48 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBCP0CG48 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBCP0CG48 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.92■□□□□ 0.3
UBCP0CG48 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms