Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.89■□□□□ 0.94
CCDC172P0C7W6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 YBX1P10-201ENST00000444752 975 ntBASIC20.89■□□□□ 0.93
CCDC172P0C7W6 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC172P0C7W6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 ZNF815P-204ENST00000434898 1737 ntBASIC20.88■□□□□ 0.93
CCDC172P0C7W6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.88■□□□□ 0.93
CCDC172P0C7W6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 PNMA6B-201ENST00000538162 1200 ntBASIC20.88■□□□□ 0.93
CCDC172P0C7W6 AL138781.1-201ENST00000566567 1274 ntBASIC20.88■□□□□ 0.93
CCDC172P0C7W6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC172P0C7W6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.87■□□□□ 0.93
CCDC172P0C7W6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.87■□□□□ 0.93
CCDC172P0C7W6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 TNXA-203ENST00000507684 2038 ntBASIC20.87■□□□□ 0.93
CCDC172P0C7W6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC172P0C7W6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 AC124283.5-201ENST00000624661 1809 ntBASIC20.86■□□□□ 0.93
CCDC172P0C7W6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 AC133041.1-202ENST00000642053 222 ntBASIC20.86■□□□□ 0.93
CCDC172P0C7W6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC172P0C7W6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 AC120498.8-201ENST00000614275 531 ntBASIC20.85■□□□□ 0.93
CCDC172P0C7W6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms