Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DQB2P05538 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DQB2P05538 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 TEX21P-204ENST00000641479 1693 ntBASIC19.64■□□□□ 0.73
HLA-DQB2P05538 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQB2P05538 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 TMEM191A-211ENST00000637163 1067 ntBASIC19.63■□□□□ 0.73
HLA-DQB2P05538 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB2P05538 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 NIFKP9-201ENST00000419265 221 ntBASIC19.62■□□□□ 0.73
HLA-DQB2P05538 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 RARRES2P10-201ENST00000564312 460 ntBASIC19.62■□□□□ 0.73
HLA-DQB2P05538 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB2P05538 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.61■□□□□ 0.73
HLA-DQB2P05538 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 AP002982.1-201ENST00000492365 877 ntBASIC19.61■□□□□ 0.73
HLA-DQB2P05538 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 AL160286.2-201ENST00000567150 934 ntBASIC19.61■□□□□ 0.73
HLA-DQB2P05538 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DQB2P05538 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB2P05538 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms