Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.29■□□□□ 0.84
TRUB2O95900 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.29■□□□□ 0.84
TRUB2O95900 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.29■□□□□ 0.84
TRUB2O95900 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRUB2O95900 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.29■□□□□ 0.84
TRUB2O95900 AC012618.2-201ENST00000428058 849 ntBASIC20.29■□□□□ 0.84
TRUB2O95900 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 AL353708.3-201ENST00000610272 989 ntBASIC20.29■□□□□ 0.84
TRUB2O95900 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRUB2O95900 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
TRUB2O95900 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRUB2O95900 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.28■□□□□ 0.84
TRUB2O95900 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRUB2O95900 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRUB2O95900 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
TRUB2O95900 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 AP002982.1-201ENST00000492365 877 ntBASIC20.28■□□□□ 0.84
TRUB2O95900 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.28■□□□□ 0.84
TRUB2O95900 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.28■□□□□ 0.84
TRUB2O95900 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.28■□□□□ 0.84
TRUB2O95900 AC233702.5-201ENST00000584107 538 ntBASIC20.28■□□□□ 0.84
TRUB2O95900 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.28■□□□□ 0.84
TRUB2O95900 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.28■□□□□ 0.84
TRUB2O95900 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRUB2O95900 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
TRUB2O95900 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRUB2O95900 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.27■□□□□ 0.84
TRUB2O95900 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TRUB2O95900 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.27■□□□□ 0.84
TRUB2O95900 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 MIR718-201ENST00000390190 70 ntBASIC20.27■□□□□ 0.84
TRUB2O95900 NIFKP9-201ENST00000419265 221 ntBASIC20.27■□□□□ 0.84
TRUB2O95900 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 AC093827.2-201ENST00000512654 315 ntBASIC20.27■□□□□ 0.84
TRUB2O95900 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.27■□□□□ 0.84
TRUB2O95900 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRUB2O95900 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TRUB2O95900 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB2O95900 ZNF815P-204ENST00000434898 1737 ntBASIC20.27■□□□□ 0.83
TRUB2O95900 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB2O95900 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRUB2O95900 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.27■□□□□ 0.83
TRUB2O95900 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRUB2O95900 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.26■□□□□ 0.83
TRUB2O95900 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 RPS2P4-201ENST00000476944 856 ntBASIC20.26■□□□□ 0.83
TRUB2O95900 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.26■□□□□ 0.83
TRUB2O95900 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.26■□□□□ 0.83
TRUB2O95900 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 HLA-A-209ENST00000638375 975 ntBASIC20.26■□□□□ 0.83
TRUB2O95900 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRUB2O95900 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRUB2O95900 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB2O95900 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB2O95900 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
TRUB2O95900 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms