Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLDN1O95832 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN1O95832 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN1O95832 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN1O95832 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN1O95832 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN1O95832 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN1O95832 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CLDN1O95832 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN1O95832 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN1O95832 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CLDN1O95832 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN1O95832 MFAP1P1-201ENST00000442257 1255 ntBASIC17.26■□□□□ 0.35
CLDN1O95832 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 FDX1P1-201ENST00000449115 551 ntBASIC17.26■□□□□ 0.35
CLDN1O95832 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN1O95832 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CLDN1O95832 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLDN1O95832 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN1O95832 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN1O95832 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN1O95832 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN1O95832 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN1O95832 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 SLC25A1P2-201ENST00000430693 912 ntBASIC17.25■□□□□ 0.35
CLDN1O95832 TSPY21P-201ENST00000433481 731 ntBASIC17.25■□□□□ 0.35
CLDN1O95832 TSPY23P-201ENST00000440136 739 ntBASIC17.25■□□□□ 0.35
CLDN1O95832 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN1O95832 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN1O95832 AL441883.1-201ENST00000566170 1045 ntBASIC17.25■□□□□ 0.35
CLDN1O95832 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN1O95832 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 AL031432.5-201ENST00000641059 760 ntBASIC17.25■□□□□ 0.35
CLDN1O95832 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN1O95832 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN1O95832 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN1O95832 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN1O95832 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN1O95832 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN1O95832 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN1O95832 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLDN1O95832 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN1O95832 AC008040.2-201ENST00000461049 708 ntBASIC17.24■□□□□ 0.35
CLDN1O95832 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN1O95832 VENTXP5-201ENST00000523979 775 ntBASIC17.24■□□□□ 0.35
CLDN1O95832 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN1O95832 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN1O95832 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 AP006587.1-201ENST00000534129 1502 ntBASIC17.24■□□□□ 0.35
CLDN1O95832 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN1O95832 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN1O95832 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN1O95832 LINC01521-201ENST00000504184 1943 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN1O95832 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN1O95832 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms