Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
GPC4O75487 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.36■□□□□ 0.69
GPC4O75487 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC4O75487 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GPC4O75487 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GPC4O75487 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC4O75487 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GPC4O75487 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GPC4O75487 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 TREX1-205ENST00000625293 1783 ntBASIC19.35■□□□□ 0.69
GPC4O75487 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC4O75487 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC4O75487 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC4O75487 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC4O75487 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC4O75487 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC4O75487 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 KRT17P3-201ENST00000420566 1262 ntBASIC19.34■□□□□ 0.69
GPC4O75487 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC4O75487 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.34■□□□□ 0.69
GPC4O75487 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC4O75487 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC4O75487 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GPC4O75487 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC4O75487 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC4O75487 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC4O75487 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
GPC4O75487 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GPC4O75487 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC4O75487 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.33■□□□□ 0.69
GPC4O75487 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GPC4O75487 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GPC4O75487 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 POU5F1P3-201ENST00000428824 1078 ntBASIC19.33■□□□□ 0.68
GPC4O75487 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC4O75487 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC4O75487 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC4O75487 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.33■□□□□ 0.68
GPC4O75487 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GPC4O75487 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
GPC4O75487 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms