Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC128676.1-201ENST00000454392 318 ntBASIC20.15■□□□□ 0.82
LRCH4O75427 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH4O75427 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
LRCH4O75427 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH4O75427 AC124016.1-201ENST00000609552 612 ntBASIC20.15■□□□□ 0.82
LRCH4O75427 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.15■□□□□ 0.82
LRCH4O75427 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH4O75427 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH4O75427 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH4O75427 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LRCH4O75427 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH4O75427 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.14■□□□□ 0.82
LRCH4O75427 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.14■□□□□ 0.81
LRCH4O75427 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRCH4O75427 AC133681.1-201ENST00000465482 601 ntBASIC20.14■□□□□ 0.81
LRCH4O75427 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRCH4O75427 HLA-A-209ENST00000638375 975 ntBASIC20.14■□□□□ 0.81
LRCH4O75427 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH4O75427 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
LRCH4O75427 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRCH4O75427 TNXA-203ENST00000507684 2038 ntBASIC20.14■□□□□ 0.81
LRCH4O75427 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 AL049812.1-201ENST00000432563 2267 ntBASIC20.13■□□□□ 0.81
LRCH4O75427 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRCH4O75427 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH4O75427 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH4O75427 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRCH4O75427 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH4O75427 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH4O75427 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH4O75427 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRCH4O75427 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH4O75427 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH4O75427 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH4O75427 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms