Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT3O75175 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNOT3O75175 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT3O75175 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 RARRES2P10-201ENST00000564312 460 ntBASIC18.73■□□□□ 0.59
CNOT3O75175 AC113410.3-201ENST00000623366 203 ntBASIC18.73■□□□□ 0.59
CNOT3O75175 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CNOT3O75175 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT3O75175 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.72■□□□□ 0.59
CNOT3O75175 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CNOT3O75175 AL121906.2-201ENST00000621597 723 ntBASIC18.72■□□□□ 0.59
CNOT3O75175 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT3O75175 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CNOT3O75175 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CNOT3O75175 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT3O75175 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT3O75175 NBPF21P-201ENST00000425093 1451 ntBASIC18.71■□□□□ 0.59
CNOT3O75175 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 AL162377.1-201ENST00000618844 1793 ntBASIC18.71■□□□□ 0.59
CNOT3O75175 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.71■□□□□ 0.59
CNOT3O75175 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.71■□□□□ 0.59
CNOT3O75175 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.71■□□□□ 0.59
CNOT3O75175 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CNOT3O75175 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CNOT3O75175 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.71■□□□□ 0.59
CNOT3O75175 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT3O75175 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CNOT3O75175 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CNOT3O75175 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT3O75175 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CNOT3O75175 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 AC092720.2-201ENST00000602388 1665 ntBASIC18.7■□□□□ 0.58
CNOT3O75175 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CNOT3O75175 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT3O75175 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT3O75175 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT3O75175 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.7■□□□□ 0.58
CNOT3O75175 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNOT3O75175 AC005082.1-201ENST00000413042 2259 ntBASIC18.7■□□□□ 0.58
CNOT3O75175 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.7■□□□□ 0.58
CNOT3O75175 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT3O75175 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.69■□□□□ 0.58
CNOT3O75175 AL512408.1-201ENST00000569378 2000 ntBASIC18.69■□□□□ 0.58
CNOT3O75175 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNOT3O75175 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms