Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF40O75150 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF40O75150 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF40O75150 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF40O75150 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF40O75150 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RNF40O75150 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RNF40O75150 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF40O75150 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF40O75150 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF40O75150 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.81■□□□□ 0.92
RNF40O75150 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF40O75150 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF40O75150 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF40O75150 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 AL049812.1-201ENST00000432563 2267 ntBASIC20.8■□□□□ 0.92
RNF40O75150 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 Z82202.1-201ENST00000623446 1880 ntBASIC20.8■□□□□ 0.92
RNF40O75150 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF40O75150 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
RNF40O75150 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF40O75150 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF40O75150 MTDHP1-201ENST00000605323 784 ntBASIC20.8■□□□□ 0.92
RNF40O75150 AL023875.1-201ENST00000640777 796 ntBASIC20.8■□□□□ 0.92
RNF40O75150 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF40O75150 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF40O75150 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF40O75150 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF40O75150 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
RNF40O75150 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RNF40O75150 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF40O75150 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF40O75150 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
RNF40O75150 REXO1L12P-201ENST00000622156 912 ntBASIC20.79■□□□□ 0.92
RNF40O75150 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RNF40O75150 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF40O75150 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 AC120498.9-201ENST00000339021 3867 ntBASIC20.79■□□□□ 0.92
RNF40O75150 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF40O75150 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF40O75150 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.78■□□□□ 0.92
RNF40O75150 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF40O75150 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF40O75150 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF40O75150 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms