Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 Z85996.1-201ENST00000494644 937 ntBASIC18.28■□□□□ 0.52
URB1O60287 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.28■□□□□ 0.52
URB1O60287 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
URB1O60287 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
URB1O60287 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 AC018553.1-201ENST00000616682 1458 ntBASIC18.27■□□□□ 0.52
URB1O60287 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.27■□□□□ 0.52
URB1O60287 AL121603.2-201ENST00000557373 2117 ntBASIC18.27■□□□□ 0.52
URB1O60287 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
URB1O60287 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.27■□□□□ 0.52
URB1O60287 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.27■□□□□ 0.52
URB1O60287 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.27■□□□□ 0.52
URB1O60287 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.27■□□□□ 0.52
URB1O60287 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.27■□□□□ 0.52
URB1O60287 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
URB1O60287 AL671883.3-201ENST00000603274 991 ntBASIC18.27■□□□□ 0.52
URB1O60287 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
URB1O60287 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.27■□□□□ 0.52
URB1O60287 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.27■□□□□ 0.51
URB1O60287 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
URB1O60287 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
URB1O60287 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
URB1O60287 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
URB1O60287 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
URB1O60287 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.26■□□□□ 0.51
URB1O60287 EMBP1-201ENST00000458200 901 ntBASIC18.26■□□□□ 0.51
URB1O60287 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.26■□□□□ 0.51
URB1O60287 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
URB1O60287 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.26■□□□□ 0.51
URB1O60287 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
URB1O60287 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.26■□□□□ 0.51
URB1O60287 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
URB1O60287 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
URB1O60287 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
URB1O60287 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.25■□□□□ 0.51
URB1O60287 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.25■□□□□ 0.51
URB1O60287 PRELID1P1-202ENST00000567272 903 ntBASIC18.25■□□□□ 0.51
URB1O60287 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
URB1O60287 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
URB1O60287 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.25■□□□□ 0.51
URB1O60287 HLA-A-209ENST00000638375 975 ntBASIC18.25■□□□□ 0.51
URB1O60287 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.25■□□□□ 0.51
URB1O60287 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
URB1O60287 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
URB1O60287 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.24■□□□□ 0.51
URB1O60287 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
URB1O60287 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.24■□□□□ 0.51
URB1O60287 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.24■□□□□ 0.51
URB1O60287 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.24■□□□□ 0.51
URB1O60287 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 HBZP1-201ENST00000354915 429 ntBASIC18.24■□□□□ 0.51
URB1O60287 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
URB1O60287 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.24■□□□□ 0.51
URB1O60287 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.24■□□□□ 0.51
URB1O60287 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
URB1O60287 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
URB1O60287 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
URB1O60287 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
URB1O60287 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms