Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.54■□□□□ 0.4
SMAD9O15198 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.54■□□□□ 0.4
SMAD9O15198 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.54■□□□□ 0.4
SMAD9O15198 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.54■□□□□ 0.4
SMAD9O15198 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SMAD9O15198 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD9O15198 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SMAD9O15198 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMAD9O15198 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMAD9O15198 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.53■□□□□ 0.4
SMAD9O15198 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SMAD9O15198 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.53■□□□□ 0.4
SMAD9O15198 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.53■□□□□ 0.4
SMAD9O15198 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.53■□□□□ 0.4
SMAD9O15198 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.53■□□□□ 0.4
SMAD9O15198 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.53■□□□□ 0.4
SMAD9O15198 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD9O15198 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.53■□□□□ 0.4
SMAD9O15198 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD9O15198 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SMAD9O15198 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SMAD9O15198 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
SMAD9O15198 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.52■□□□□ 0.4
SMAD9O15198 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 KRT18P16-201ENST00000510337 1294 ntBASIC17.52■□□□□ 0.4
SMAD9O15198 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SMAD9O15198 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.52■□□□□ 0.4
SMAD9O15198 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.52■□□□□ 0.4
SMAD9O15198 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMAD9O15198 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.52■□□□□ 0.4
SMAD9O15198 AC004264.1-201ENST00000608354 794 ntBASIC17.52■□□□□ 0.4
SMAD9O15198 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.52■□□□□ 0.4
SMAD9O15198 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.52■□□□□ 0.4
SMAD9O15198 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SMAD9O15198 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMAD9O15198 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SMAD9O15198 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SMAD9O15198 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
SMAD9O15198 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SMAD9O15198 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMAD9O15198 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms