Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ABCD4O14678 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.1■□□□□ 0.33
ABCD4O14678 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ABCD4O14678 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.1■□□□□ 0.33
ABCD4O14678 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.1■□□□□ 0.33
ABCD4O14678 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ABCD4O14678 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.1■□□□□ 0.33
ABCD4O14678 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD4O14678 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD4O14678 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD4O14678 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.09■□□□□ 0.33
ABCD4O14678 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ABCD4O14678 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ABCD4O14678 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.09■□□□□ 0.33
ABCD4O14678 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.09■□□□□ 0.33
ABCD4O14678 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.09■□□□□ 0.33
ABCD4O14678 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ABCD4O14678 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
ABCD4O14678 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ABCD4O14678 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 AP006587.1-201ENST00000534129 1502 ntBASIC17.09■□□□□ 0.33
ABCD4O14678 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
ABCD4O14678 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ABCD4O14678 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ABCD4O14678 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ABCD4O14678 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.08■□□□□ 0.33
ABCD4O14678 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ABCD4O14678 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ABCD4O14678 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ABCD4O14678 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ABCD4O14678 AC116351.2-201ENST00000606540 1585 ntBASIC17.08■□□□□ 0.32
ABCD4O14678 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ABCD4O14678 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ABCD4O14678 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ABCD4O14678 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.08■□□□□ 0.32
ABCD4O14678 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 AP002982.1-201ENST00000492365 877 ntBASIC17.08■□□□□ 0.32
ABCD4O14678 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.08■□□□□ 0.32
ABCD4O14678 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.08■□□□□ 0.32
ABCD4O14678 AC073912.3-201ENST00000624414 853 ntBASIC17.08■□□□□ 0.32
ABCD4O14678 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
ABCD4O14678 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.08■□□□□ 0.32
ABCD4O14678 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ABCD4O14678 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.07■□□□□ 0.32
ABCD4O14678 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ABCD4O14678 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
ABCD4O14678 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
ABCD4O14678 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ABCD4O14678 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.07■□□□□ 0.32
ABCD4O14678 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.07■□□□□ 0.32
ABCD4O14678 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.07■□□□□ 0.32
ABCD4O14678 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.07■□□□□ 0.32
ABCD4O14678 CD177P1-201ENST00000606252 935 ntBASIC17.07■□□□□ 0.32
ABCD4O14678 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.07■□□□□ 0.32
ABCD4O14678 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.07■□□□□ 0.32
ABCD4O14678 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ABCD4O14678 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms