Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 Z85996.1-201ENST00000494644 937 ntBASIC21.8■■□□□ 1.08
DDX39AO00148 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.8■■□□□ 1.08
DDX39AO00148 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX39AO00148 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDX39AO00148 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX39AO00148 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX39AO00148 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX39AO00148 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX39AO00148 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX39AO00148 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX39AO00148 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX39AO00148 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX39AO00148 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
DDX39AO00148 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX39AO00148 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX39AO00148 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DDX39AO00148 AC004951.3-201ENST00000418645 1148 ntBASIC21.78■■□□□ 1.08
DDX39AO00148 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.78■■□□□ 1.08
DDX39AO00148 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX39AO00148 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX39AO00148 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX39AO00148 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX39AO00148 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX39AO00148 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.77■■□□□ 1.08
DDX39AO00148 AC091390.4-202ENST00000476426 537 ntBASIC21.77■■□□□ 1.08
DDX39AO00148 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX39AO00148 AC097488.1-201ENST00000507834 756 ntBASIC21.77■■□□□ 1.08
DDX39AO00148 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.77■■□□□ 1.08
DDX39AO00148 SLC25A1P4-201ENST00000567977 778 ntBASIC21.77■■□□□ 1.08
DDX39AO00148 LINC01023-201ENST00000606054 436 ntBASIC21.77■■□□□ 1.08
DDX39AO00148 AC130371.2-201ENST00000619443 611 ntBASIC21.77■■□□□ 1.08
DDX39AO00148 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
DDX39AO00148 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX39AO00148 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.77■■□□□ 1.07
DDX39AO00148 CYP2D8P-201ENST00000433633 1490 ntBASIC21.77■■□□□ 1.07
DDX39AO00148 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.77■■□□□ 1.07
DDX39AO00148 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
DDX39AO00148 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX39AO00148 CRYGFP-201ENST00000418459 633 ntBASIC21.76■■□□□ 1.07
DDX39AO00148 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX39AO00148 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX39AO00148 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
DDX39AO00148 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.76■■□□□ 1.07
DDX39AO00148 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
DDX39AO00148 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms