Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP99D6REC4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CFAP99D6REC4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 GCSHP5-201ENST00000443090 522 ntBASIC19.28■□□□□ 0.68
CFAP99D6REC4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 AL158047.1-201ENST00000445918 881 ntBASIC19.28■□□□□ 0.68
CFAP99D6REC4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP99D6REC4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.28■□□□□ 0.68
CFAP99D6REC4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
CFAP99D6REC4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 TREX1-205ENST00000625293 1783 ntBASIC19.27■□□□□ 0.68
CFAP99D6REC4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
CFAP99D6REC4 AC098590.1-201ENST00000468126 897 ntBASIC19.27■□□□□ 0.68
CFAP99D6REC4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CFAP99D6REC4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP99D6REC4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP99D6REC4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP99D6REC4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP99D6REC4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP99D6REC4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP99D6REC4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 C1QL1P1-201ENST00000568105 661 ntBASIC19.26■□□□□ 0.67
CFAP99D6REC4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP99D6REC4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CFAP99D6REC4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms