Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LINC01546A6NGU7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.66□□□□□ -0.22
LINC01546A6NGU7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 AC104187.1-201ENST00000607510 612 ntBASIC13.66□□□□□ -0.22
LINC01546A6NGU7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.66□□□□□ -0.22
LINC01546A6NGU7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01546A6NGU7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC019069.1-201ENST00000610008 1333 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 UNC93B3-201ENST00000308076 687 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC024257.2-201ENST00000549699 147 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC134043.2-201ENST00000624206 2238 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms