Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 KRT16P6-202ENST00000425692 1426 ntBASIC20.88■□□□□ 0.93
CCDC66A2RUB6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 AL031963.3-201ENST00000606441 850 ntBASIC20.88■□□□□ 0.93
CCDC66A2RUB6 AC105020.6-201ENST00000621523 1217 ntBASIC20.88■□□□□ 0.93
CCDC66A2RUB6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC66A2RUB6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 PRORSD1P-202ENST00000563365 2154 ntBASIC20.87■□□□□ 0.93
CCDC66A2RUB6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC66A2RUB6 KRT8P20-201ENST00000423953 1409 ntBASIC20.87■□□□□ 0.93
CCDC66A2RUB6 AC068338.2-201ENST00000563278 1430 ntBASIC20.87■□□□□ 0.93
CCDC66A2RUB6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 AC012313.1-201ENST00000593393 3059 ntBASIC20.86■□□□□ 0.93
CCDC66A2RUB6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 CNN2P6-201ENST00000439038 900 ntBASIC20.86■□□□□ 0.93
CCDC66A2RUB6 DUX4L16-201ENST00000555130 1264 ntBASIC20.86■□□□□ 0.93
CCDC66A2RUB6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.86■□□□□ 0.93
CCDC66A2RUB6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC66A2RUB6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 AC093484.2-201ENST00000580996 2166 ntBASIC20.85■□□□□ 0.93
CCDC66A2RUB6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 KRT18P68-201ENST00000392293 1000 ntBASIC20.85■□□□□ 0.93
CCDC66A2RUB6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 AL162430.1-201ENST00000480705 870 ntBASIC20.85■□□□□ 0.93
CCDC66A2RUB6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC66A2RUB6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms