Protein–RNA interactions for Protein: A0A1B0GVZ6

MBD3L2B, Methyl-CpG-binding domain protein 3-like 2B, humanhuman

Predicted RBP Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L2BA0A1B0GVZ6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC099778.1-201ENST00000568593 1911 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 COX11P1-201ENST00000489116 835 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 YBX1P2-201ENST00000489612 999 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AL512604.3-201ENST00000569583 964 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC141257.4-201ENST00000634557 245 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC136944.6-201ENST00000634818 245 ntBASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 RNF152P1-201ENST00000397754 604 ntBASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MBD3L2BA0A1B0GVZ6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 AC092647.4-201ENST00000457211 535 ntBASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 PRSS44-201ENST00000515154 1146 ntBASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 KRT8P11-201ENST00000409686 1436 ntBASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.58■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MBD3L2BA0A1B0GVZ6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms