Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 PGM5P4-201ENST00000421970 445 ntBASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
TRAV13-2A0A0B4J235 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TRAV13-2A0A0B4J235 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRAV13-2A0A0B4J235 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms