Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MIR638-201ENST00000385237 100 ntBASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AL355472.2-201ENST00000422958 438 ntBASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC018553.1-201ENST00000616682 1458 ntBASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms