Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC083880.1-201ENST00000608266 535 ntBASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL121829.2-201ENST00000620908 328 ntBASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC090340.1-201ENST00000620778 4980 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AL020996.1-203ENST00000536896 2307 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC069152.1-201ENST00000438030 544 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SOX15-203ENST00000570788 1093 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC092666.2-201ENST00000613287 246 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AC141586.3-201ENST00000562166 1838 ntBASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-8A0A0A6YYG3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms