Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 KRT17P3-201ENST00000420566 1262 ntBASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 AC006058.3-201ENST00000606217 1069 ntBASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 AL391005.1-201ENST00000623953 2435 ntBASIC13.98□□□□□ -0.17
TRAV26-1A0A087WT03 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 AC008894.3-201ENST00000624324 3103 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 BX323043.1-201ENST00000641006 1765 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 POM121L13P-201ENST00000422362 380 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 RPS2P52-201ENST00000469610 820 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 AC008403.3-201ENST00000598924 454 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 AC120498.8-201ENST00000614275 531 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 AC012313.1-201ENST00000593393 3059 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 TNRC18P3-201ENST00000441896 2691 ntBASIC13.97□□□□□ -0.17
TRAV26-1A0A087WT03 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 BX119927.1-201ENST00000636596 1552 ntBASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 KRT18P29-201ENST00000397031 1267 ntBASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV26-1A0A087WT03 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms