Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL133255.1-201ENST00000606374 441 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AF287957.1-201ENST00000607368 1595 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 CASC19-246ENST00000641625 1606 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.13□□□□□ -1.43
PDGFAP04085 AC013488.1-201ENST00000526618 1838 ntBASIC6.13□□□□□ -1.43
PDGFAP04085 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFAP04085 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PDGFAP04085 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 AC022905.1-201ENST00000503430 3048 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 RNA5SP435-201ENST00000364044 108 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 RN7SKP275-201ENST00000364626 301 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 Y_RNA.384-201ENST00000383909 102 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 RNU6-606P-201ENST00000384721 111 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 RPL9P21-201ENST00000392269 505 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 RN7SKP235-201ENST00000410662 305 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFAP04085 AC236972.2-201ENST00000434979 310 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 IFNA20P-201ENST00000436840 528 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AMYP1-201ENST00000440059 1023 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 PPIAP20-201ENST00000449839 135 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 snoU13.8-201ENST00000458890 104 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 MRPS17P3-201ENST00000465453 385 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC094085.1-201ENST00000468914 584 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC018645.1-201ENST00000505003 109 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 RNU6-327P-201ENST00000516270 127 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFAP04085 IGKV3D-34-201ENST00000522638 302 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
PDGFAP04085 RACGAP1P-201ENST00000550663 1879 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 SETP2-201ENST00000553886 926 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFAP04085 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 AL360085.1-201ENST00000604713 532 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC113139.1-201ENST00000605049 239 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC090948.1-201ENST00000607464 549 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC130324.3-201ENST00000614165 542 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AL603758.1-201ENST00000618654 241 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFAP04085 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFAP04085 AC083837.1-201ENST00000565297 2994 ntBASIC6.12□□□□□ -1.43
PDGFAP04085 AC130650.2-201ENST00000618736 2403 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFAP04085 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 CDY7P-201ENST00000429883 1604 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDGFAP04085 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 MTND4P35-201ENST00000604257 1375 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDGFAP04085 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 RN7SKP78-201ENST00000364711 318 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 RNU6-996P-201ENST00000365438 107 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 RNU6-1207P-201ENST00000384343 107 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms