RNA–Protein interactions for RNA: ENST00000365438.1

RNU6-996P-201, Transcript of RNA, U6 small nuclear 996, pseudogene, humanhuman

BASIC

Gene RNU6-996P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-996P-201ENST00000365438 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
RNU6-996P-201ENST00000365438 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
RNU6-996P-201ENST00000365438 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
RNU6-996P-201ENST00000365438 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
RNU6-996P-201ENST00000365438 FOXD1Q16676 465 aa14.7□□□□□ -0.06
RNU6-996P-201ENST00000365438 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
RNU6-996P-201ENST00000365438 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
RNU6-996P-201ENST00000365438 ADRA2BP18089 450 aa14.06□□□□□ -0.16
RNU6-996P-201ENST00000365438 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
RNU6-996P-201ENST00000365438 MSH5O43196 834 aa13.59□□□□□ -0.23
RNU6-996P-201ENST00000365438 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
RNU6-996P-201ENST00000365438 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
RNU6-996P-201ENST00000365438 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
RNU6-996P-201ENST00000365438 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
RNU6-996P-201ENST00000365438 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
RNU6-996P-201ENST00000365438 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
RNU6-996P-201ENST00000365438 KCNA4P22459 653 aa12.54□□□□□ -0.4
RNU6-996P-201ENST00000365438 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
RNU6-996P-201ENST00000365438 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
RNU6-996P-201ENST00000365438 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
RNU6-996P-201ENST00000365438 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
RNU6-996P-201ENST00000365438 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
RNU6-996P-201ENST00000365438 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
RNU6-996P-201ENST00000365438 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
RNU6-996P-201ENST00000365438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNU6-996P-201ENST00000365438 SLC4A2P04920 1241 aa11.72□□□□□ -0.53
RNU6-996P-201ENST00000365438 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
RNU6-996P-201ENST00000365438 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
RNU6-996P-201ENST00000365438 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
RNU6-996P-201ENST00000365438 ZBTB22O15209 634 aa11.54□□□□□ -0.56
RNU6-996P-201ENST00000365438 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
RNU6-996P-201ENST00000365438 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
RNU6-996P-201ENST00000365438 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
RNU6-996P-201ENST00000365438 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
RNU6-996P-201ENST00000365438 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
RNU6-996P-201ENST00000365438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
RNU6-996P-201ENST00000365438 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
RNU6-996P-201ENST00000365438 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
RNU6-996P-201ENST00000365438 APLP2Q06481 763 aa11.28□□□□□ -0.6
RNU6-996P-201ENST00000365438 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
RNU6-996P-201ENST00000365438 CAPN15O75808 1086 aa11.2□□□□□ -0.62
RNU6-996P-201ENST00000365438 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
RNU6-996P-201ENST00000365438 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
RNU6-996P-201ENST00000365438 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
RNU6-996P-201ENST00000365438 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
RNU6-996P-201ENST00000365438 DSG3P32926 999 aa11.05□□□□□ -0.64
RNU6-996P-201ENST00000365438 ABCB7O75027 752 aa10.98□□□□□ -0.65
RNU6-996P-201ENST00000365438 POLA2Q14181 598 aa10.94□□□□□ -0.66
RNU6-996P-201ENST00000365438 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
RNU6-996P-201ENST00000365438 FBLN2P98095 1184 aa10.67□□□□□ -0.7
RNU6-996P-201ENST00000365438 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
RNU6-996P-201ENST00000365438 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
RNU6-996P-201ENST00000365438 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
RNU6-996P-201ENST00000365438 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
RNU6-996P-201ENST00000365438 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
RNU6-996P-201ENST00000365438 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
RNU6-996P-201ENST00000365438 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
RNU6-996P-201ENST00000365438 AKT1S1Q96B36 256 aa10.39□□□□□ -0.75
RNU6-996P-201ENST00000365438 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
RNU6-996P-201ENST00000365438 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
RNU6-996P-201ENST00000365438 FKBP8Q14318 412 aa10.31□□□□□ -0.76
RNU6-996P-201ENST00000365438 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
RNU6-996P-201ENST00000365438 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
RNU6-996P-201ENST00000365438 PROM2Q8N271 834 aa10.21□□□□□ -0.77
RNU6-996P-201ENST00000365438 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
RNU6-996P-201ENST00000365438 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
RNU6-996P-201ENST00000365438 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
RNU6-996P-201ENST00000365438 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
RNU6-996P-201ENST00000365438 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
RNU6-996P-201ENST00000365438 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
RNU6-996P-201ENST00000365438 FXR2P51116 673 aaKnown RBP eCLIP9.99□□□□□ -0.81
RNU6-996P-201ENST00000365438 PIP4P2Q8N4L2 257 aa9.98□□□□□ -0.81
RNU6-996P-201ENST00000365438 FBXO3Q9UK99 471 aa9.97□□□□□ -0.81
RNU6-996P-201ENST00000365438 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
RNU6-996P-201ENST00000365438 POTEHQ6S545 545 aa9.9□□□□□ -0.82
RNU6-996P-201ENST00000365438 CHADLQ6NUI6 762 aa9.89□□□□□ -0.83
RNU6-996P-201ENST00000365438 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
RNU6-996P-201ENST00000365438 MIER1Q8N108 512 aa9.84□□□□□ -0.83
RNU6-996P-201ENST00000365438 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
RNU6-996P-201ENST00000365438 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
RNU6-996P-201ENST00000365438 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
RNU6-996P-201ENST00000365438 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
RNU6-996P-201ENST00000365438 MNX1P50219 401 aaPredicted RBP9.78□□□□□ -0.84
RNU6-996P-201ENST00000365438 NPM1P06748 294 aaKnown RBP eCLIP9.72□□□□□ -0.85
RNU6-996P-201ENST00000365438 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
RNU6-996P-201ENST00000365438 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
RNU6-996P-201ENST00000365438 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
RNU6-996P-201ENST00000365438 C19orf67A6NJJ6 358 aa9.66□□□□□ -0.86
RNU6-996P-201ENST00000365438 HAX1O00165 279 aa9.66□□□□□ -0.86
RNU6-996P-201ENST00000365438 NUBP1P53384 320 aa9.62□□□□□ -0.87
RNU6-996P-201ENST00000365438 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
RNU6-996P-201ENST00000365438 EVX2Q03828 476 aa9.59□□□□□ -0.87
RNU6-996P-201ENST00000365438 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
RNU6-996P-201ENST00000365438 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
RNU6-996P-201ENST00000365438 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
RNU6-996P-201ENST00000365438 TSPYL2Q9H2G4 693 aaPredicted RBP9.55□□□□□ -0.88
RNU6-996P-201ENST00000365438 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
RNU6-996P-201ENST00000365438 FAM212AQ96EL1 285 aa9.52□□□□□ -0.89
RNU6-996P-201ENST00000365438 DCAF8Q5TAQ9 597 aa9.5□□□□□ -0.89
RNU6-996P-201ENST00000365438 ZNF579Q8NAF0 562 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms