RNA–Protein interactions for RNA: ENST00000359079.8

SGMS2-201, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-201ENST00000359079 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
SGMS2-201ENST00000359079 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
SGMS2-201ENST00000359079 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
SGMS2-201ENST00000359079 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
SGMS2-201ENST00000359079 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
SGMS2-201ENST00000359079 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
SGMS2-201ENST00000359079 FOXD1Q16676 465 aa11.06□□□□□ -0.64
SGMS2-201ENST00000359079 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
SGMS2-201ENST00000359079 KCNA4P22459 653 aa10.86□□□□□ -0.67
SGMS2-201ENST00000359079 ADRA2BP18089 450 aa10.72□□□□□ -0.69
SGMS2-201ENST00000359079 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
SGMS2-201ENST00000359079 PPP6R1Q9UPN7 881 aa10.54□□□□□ -0.72
SGMS2-201ENST00000359079 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
SGMS2-201ENST00000359079 PIAS4Q8N2W9 510 aaPredicted RBP10.44□□□□□ -0.74
SGMS2-201ENST00000359079 SLC4A1APQ9BWU0 796 aaKnown RBP10.4□□□□□ -0.75
SGMS2-201ENST00000359079 MSH5O43196 834 aa10.28□□□□□ -0.76
SGMS2-201ENST00000359079 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
SGMS2-201ENST00000359079 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
SGMS2-201ENST00000359079 ZBTB22O15209 634 aa10.05□□□□□ -0.8
SGMS2-201ENST00000359079 AMER1Q5JTC6 1135 aaPredicted RBP10□□□□□ -0.81
SGMS2-201ENST00000359079 NPM3O75607 178 aaKnown RBP9.93□□□□□ -0.82
SGMS2-201ENST00000359079 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
SGMS2-201ENST00000359079 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.85
SGMS2-201ENST00000359079 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
SGMS2-201ENST00000359079 MAPK8IP2Q13387 824 aaPredicted RBP9.59□□□□□ -0.87
SGMS2-201ENST00000359079 CNKSR2Q8WXI2 1034 aa9.55□□□□□ -0.88
SGMS2-201ENST00000359079 FKBP8Q14318 412 aa9.53□□□□□ -0.88
SGMS2-201ENST00000359079 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
SGMS2-201ENST00000359079 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
SGMS2-201ENST00000359079 DNAJC5BQ9UF47 199 aa9.32□□□□□ -0.92
SGMS2-201ENST00000359079 RNF216Q9NWF9 866 aaPredicted RBP9.3□□□□□ -0.92
SGMS2-201ENST00000359079 HOXD11P31277 338 aaPredicted RBP9.27□□□□□ -0.93
SGMS2-201ENST00000359079 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
SGMS2-201ENST00000359079 SLC4A2P04920 1241 aa9.21□□□□□ -0.93
SGMS2-201ENST00000359079 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
SGMS2-201ENST00000359079 TAOK2Q9UL54 1235 aa9.15□□□□□ -0.94
SGMS2-201ENST00000359079 DCAF8L1A6NGE4 600 aa9.13□□□□□ -0.95
SGMS2-201ENST00000359079 BCANQ96GW7 911 aa9.13□□□□□ -0.95
SGMS2-201ENST00000359079 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
SGMS2-201ENST00000359079 CACNB1Q02641 598 aaPredicted RBP9.08□□□□□ -0.96
SGMS2-201ENST00000359079 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
SGMS2-201ENST00000359079 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
SGMS2-201ENST00000359079 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
SGMS2-201ENST00000359079 ATF5Q9Y2D1 282 aaPredicted RBP8.96□□□□□ -0.98
SGMS2-201ENST00000359079 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
SGMS2-201ENST00000359079 KDM2AQ9Y2K7 1162 aa8.91□□□□□ -0.98
SGMS2-201ENST00000359079 FBLN2P98095 1184 aa8.87□□□□□ -0.99
SGMS2-201ENST00000359079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
SGMS2-201ENST00000359079 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
SGMS2-201ENST00000359079 TULP1O00294 542 aaPredicted RBP8.81□□□□□ -1
SGMS2-201ENST00000359079 PKD2Q13563 968 aa8.8□□□□□ -1
SGMS2-201ENST00000359079 FBXO3Q9UK99 471 aa8.8□□□□□ -1
SGMS2-201ENST00000359079 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
SGMS2-201ENST00000359079 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
SGMS2-201ENST00000359079 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
SGMS2-201ENST00000359079 RNF39Q9H2S5 420 aa8.76□□□□□ -1.01
SGMS2-201ENST00000359079 PAXIP1Q6ZW49 1069 aaPredicted RBP8.73□□□□□ -1.01
SGMS2-201ENST00000359079 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
SGMS2-201ENST00000359079 NPM1P06748 294 aaKnown RBP eCLIP8.71□□□□□ -1.01
SGMS2-201ENST00000359079 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
SGMS2-201ENST00000359079 U3KPZ7 1027 aaPredicted RBP8.68□□□□□ -1.02
SGMS2-201ENST00000359079 C1QBPQ07021 282 aaKnown RBP8.68□□□□□ -1.02
SGMS2-201ENST00000359079 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
SGMS2-201ENST00000359079 BBXQ8WY36 941 aaPredicted RBP8.66□□□□□ -1.02
SGMS2-201ENST00000359079 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
SGMS2-201ENST00000359079 ARXQ96QS3 562 aa8.66□□□□□ -1.02
SGMS2-201ENST00000359079 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
SGMS2-201ENST00000359079 PROM2Q8N271 834 aa8.61□□□□□ -1.03
SGMS2-201ENST00000359079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.59□□□□□ -1.03
SGMS2-201ENST00000359079 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
SGMS2-201ENST00000359079 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
SGMS2-201ENST00000359079 APLP2Q06481 763 aa8.56□□□□□ -1.04
SGMS2-201ENST00000359079 SAMD1Q6SPF0 538 aaPredicted RBP8.56□□□□□ -1.04
SGMS2-201ENST00000359079 MKRN4PQ13434 485 aaPredicted RBP8.55□□□□□ -1.04
SGMS2-201ENST00000359079 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
SGMS2-201ENST00000359079 SPRYD3Q8NCJ5 442 aa8.54□□□□□ -1.04
SGMS2-201ENST00000359079 NBR1Q14596 966 aa8.51□□□□□ -1.05
SGMS2-201ENST00000359079 RGL2O15211 777 aa8.5□□□□□ -1.05
SGMS2-201ENST00000359079 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SGMS2-201ENST00000359079 CAPN15O75808 1086 aa8.47□□□□□ -1.05
SGMS2-201ENST00000359079 POTEHQ6S545 545 aa8.47□□□□□ -1.05
SGMS2-201ENST00000359079 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
SGMS2-201ENST00000359079 SPINK5Q9NQ38 1064 aaPredicted RBP8.45□□□□□ -1.06
SGMS2-201ENST00000359079 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
SGMS2-201ENST00000359079 SPOCK2Q92563 424 aa8.43□□□□□ -1.06
SGMS2-201ENST00000359079 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
SGMS2-201ENST00000359079 CHGAP10645 457 aaKnown RBP8.4□□□□□ -1.07
SGMS2-201ENST00000359079 TRHP20396 242 aaPredicted RBP8.4□□□□□ -1.07
SGMS2-201ENST00000359079 C14orf37Q86TY3 774 aa8.4□□□□□ -1.07
SGMS2-201ENST00000359079 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
SGMS2-201ENST00000359079 DSG3P32926 999 aa8.31□□□□□ -1.08
SGMS2-201ENST00000359079 ABCB7O75027 752 aa8.29□□□□□ -1.08
SGMS2-201ENST00000359079 SUPT5HO00267 1087 aaKnown RBP8.27□□□□□ -1.09
SGMS2-201ENST00000359079 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
SGMS2-201ENST00000359079 PLCD3Q8N3E9 789 aa8.23□□□□□ -1.09
SGMS2-201ENST00000359079 POLA2Q14181 598 aa8.21□□□□□ -1.09
SGMS2-201ENST00000359079 PODXL2Q9NZ53 605 aa8.21□□□□□ -1.09
SGMS2-201ENST00000359079 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
SGMS2-201ENST00000359079 HS6ST3Q8IZP7 471 aa8.19□□□□□ -1.1
SGMS2-201ENST00000359079 MIER1Q8N108 512 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms