Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC139493.1-201ENST00000604368 397 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 AC104695.2-201ENST00000605056 775 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 SNORD96A-201ENST00000606577 79 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 SDR42E1P1-201ENST00000611327 477 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 AC129915.3-201ENST00000634128 948 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 AC104162.1-201ENST00000430831 2382 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 AL139384.2-201ENST00000613809 3590 ntBASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS5Q9UPZ3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL157831.2-201ENST00000564681 3095 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC005034.3-201ENST00000604845 1747 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 Y_RNA.80-201ENST00000362996 102 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RNA5SP242-201ENST00000364171 118 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 SNORA58B-201ENST00000364259 136 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 BTBD10P2-201ENST00000404779 676 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RGS17P1-201ENST00000423358 553 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC104651.2-201ENST00000447549 528 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RPL7P15-201ENST00000461190 712 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RN7SL273P-201ENST00000481561 299 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC092824.1-201ENST00000483524 576 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RPL38P3-201ENST00000484463 213 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 OR4D12P-201ENST00000509361 911 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC006499.2-201ENST00000513470 337 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 SNORD46.2-201ENST00000516021 102 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC022868.1-201ENST00000517767 391 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL121612.2-201ENST00000612261 482 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AL445647.2-201ENST00000615170 130 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 MIR7854-201ENST00000620068 65 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 MIR193BHG-214ENST00000641765 509 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 OR11H5P-202ENST00000641612 1325 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 AC093297.3-201ENST00000607056 2517 ntBASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS5Q9UPZ3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 AC122713.2-201ENST00000624942 3335 ntBASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 SNORA38B-201ENST00000363524 131 ntBASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RNU6-1097P-201ENST00000363586 107 ntBASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RNU6-996P-201ENST00000365438 107 ntBASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RNU6-1040P-201ENST00000383974 107 ntBASIC7.72□□□□□ -1.17
HPS5Q9UPZ3 RNU6-1109P-201ENST00000391187 107 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms