RNA–Protein interactions for RNA: ENST00000391187.1

RNU6-1109P-201, Transcript of RNA, U6 small nuclear 1109, pseudogene, humanhuman

BASIC

Gene RNU6-1109P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1109P-201ENST00000391187 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
RNU6-1109P-201ENST00000391187 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
RNU6-1109P-201ENST00000391187 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
RNU6-1109P-201ENST00000391187 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
RNU6-1109P-201ENST00000391187 FOXD1Q16676 465 aa15.73■□□□□ 0.11
RNU6-1109P-201ENST00000391187 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
RNU6-1109P-201ENST00000391187 MSH5O43196 834 aa14.74□□□□□ -0.05
RNU6-1109P-201ENST00000391187 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
RNU6-1109P-201ENST00000391187 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
RNU6-1109P-201ENST00000391187 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
RNU6-1109P-201ENST00000391187 ADRA2BP18089 450 aa14.58□□□□□ -0.08
RNU6-1109P-201ENST00000391187 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
RNU6-1109P-201ENST00000391187 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
RNU6-1109P-201ENST00000391187 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
RNU6-1109P-201ENST00000391187 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
RNU6-1109P-201ENST00000391187 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
RNU6-1109P-201ENST00000391187 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
RNU6-1109P-201ENST00000391187 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
RNU6-1109P-201ENST00000391187 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
RNU6-1109P-201ENST00000391187 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
RNU6-1109P-201ENST00000391187 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
RNU6-1109P-201ENST00000391187 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
RNU6-1109P-201ENST00000391187 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
RNU6-1109P-201ENST00000391187 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
RNU6-1109P-201ENST00000391187 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
RNU6-1109P-201ENST00000391187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
RNU6-1109P-201ENST00000391187 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
RNU6-1109P-201ENST00000391187 KCNA4P22459 653 aa11.9□□□□□ -0.5
RNU6-1109P-201ENST00000391187 CAPN15O75808 1086 aa11.81□□□□□ -0.52
RNU6-1109P-201ENST00000391187 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
RNU6-1109P-201ENST00000391187 DSG3P32926 999 aa11.75□□□□□ -0.53
RNU6-1109P-201ENST00000391187 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
RNU6-1109P-201ENST00000391187 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
RNU6-1109P-201ENST00000391187 APLP2Q06481 763 aa11.54□□□□□ -0.56
RNU6-1109P-201ENST00000391187 ABCB7O75027 752 aa11.52□□□□□ -0.57
RNU6-1109P-201ENST00000391187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
RNU6-1109P-201ENST00000391187 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
RNU6-1109P-201ENST00000391187 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
RNU6-1109P-201ENST00000391187 POTEHQ6S545 545 aa11.46□□□□□ -0.57
RNU6-1109P-201ENST00000391187 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
RNU6-1109P-201ENST00000391187 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
RNU6-1109P-201ENST00000391187 POLA2Q14181 598 aa11.24□□□□□ -0.61
RNU6-1109P-201ENST00000391187 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
RNU6-1109P-201ENST00000391187 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
RNU6-1109P-201ENST00000391187 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
RNU6-1109P-201ENST00000391187 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1109P-201ENST00000391187 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
RNU6-1109P-201ENST00000391187 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
RNU6-1109P-201ENST00000391187 ZBTB22O15209 634 aa10.92□□□□□ -0.66
RNU6-1109P-201ENST00000391187 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
RNU6-1109P-201ENST00000391187 OSCARQ8IYS5 282 aa10.86□□□□□ -0.67
RNU6-1109P-201ENST00000391187 REM2Q8IYK8 340 aaPredicted RBP10.83□□□□□ -0.68
RNU6-1109P-201ENST00000391187 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
RNU6-1109P-201ENST00000391187 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
RNU6-1109P-201ENST00000391187 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
RNU6-1109P-201ENST00000391187 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
RNU6-1109P-201ENST00000391187 FBLN2P98095 1184 aa10.65□□□□□ -0.7
RNU6-1109P-201ENST00000391187 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
RNU6-1109P-201ENST00000391187 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
RNU6-1109P-201ENST00000391187 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
RNU6-1109P-201ENST00000391187 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
RNU6-1109P-201ENST00000391187 HAX1O00165 279 aa10.6□□□□□ -0.71
RNU6-1109P-201ENST00000391187 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
RNU6-1109P-201ENST00000391187 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
RNU6-1109P-201ENST00000391187 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
RNU6-1109P-201ENST00000391187 EVX2Q03828 476 aa10.47□□□□□ -0.73
RNU6-1109P-201ENST00000391187 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
RNU6-1109P-201ENST00000391187 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
RNU6-1109P-201ENST00000391187 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
RNU6-1109P-201ENST00000391187 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU6-1109P-201ENST00000391187 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
RNU6-1109P-201ENST00000391187 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
RNU6-1109P-201ENST00000391187 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
RNU6-1109P-201ENST00000391187 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
RNU6-1109P-201ENST00000391187 GABBR2O75899 941 aa10.2□□□□□ -0.78
RNU6-1109P-201ENST00000391187 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
RNU6-1109P-201ENST00000391187 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
RNU6-1109P-201ENST00000391187 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
RNU6-1109P-201ENST00000391187 LHX8Q68G74 356 aa10.03□□□□□ -0.8
RNU6-1109P-201ENST00000391187 SPDYE4A6NLX3 237 aa10□□□□□ -0.81
RNU6-1109P-201ENST00000391187 CREBZFQ9NS37 354 aa10□□□□□ -0.81
RNU6-1109P-201ENST00000391187 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
RNU6-1109P-201ENST00000391187 POTEIP0CG38 1075 aa9.99□□□□□ -0.81
RNU6-1109P-201ENST00000391187 CLCN6P51797 869 aa9.95□□□□□ -0.82
RNU6-1109P-201ENST00000391187 ZRANB1Q9UGI0 708 aa9.95□□□□□ -0.82
RNU6-1109P-201ENST00000391187 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
RNU6-1109P-201ENST00000391187 DCBLD2Q96PD2 775 aa9.9□□□□□ -0.82
RNU6-1109P-201ENST00000391187 GALR2O43603 387 aaPredicted RBP9.83□□□□□ -0.84
RNU6-1109P-201ENST00000391187 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
RNU6-1109P-201ENST00000391187 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
RNU6-1109P-201ENST00000391187 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
RNU6-1109P-201ENST00000391187 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
RNU6-1109P-201ENST00000391187 PROM2Q8N271 834 aa9.69□□□□□ -0.86
RNU6-1109P-201ENST00000391187 POTEB2H3BUK9 544 aa9.67□□□□□ -0.86
RNU6-1109P-201ENST00000391187 PELP1Q8IZL8 1130 aaKnown RBP9.67□□□□□ -0.86
RNU6-1109P-201ENST00000391187 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
RNU6-1109P-201ENST00000391187 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
RNU6-1109P-201ENST00000391187 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
RNU6-1109P-201ENST00000391187 ATMINO43313 823 aaPredicted RBP9.59□□□□□ -0.87
RNU6-1109P-201ENST00000391187 ASTLQ6HA08 431 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms