Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL049872.1-201ENST00000556323 322 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AP005262.1-201ENST00000582646 997 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AC112220.3-201ENST00000605502 502 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AP005432.2-201ENST00000608162 586 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 Z95327.3-201ENST00000610385 572 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AC025594.3-201ENST00000613068 790 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 AC009704.2-201ENST00000618739 483 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CHAMP1Q96JM3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AL121950.1-201ENST00000624993 2077 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 Y_RNA.311-201ENST00000365068 96 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 MIR217-201ENST00000384817 110 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 RNU1-77P-201ENST00000390868 162 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AL035079.1-201ENST00000405210 287 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AL512430.2-201ENST00000406786 339 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 TPT1P2-201ENST00000413105 503 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 BMS1P17-202ENST00000416720 316 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 CYCSP46-201ENST00000423569 204 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 MED14P1-201ENST00000430517 648 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 RPL12P17-201ENST00000432393 498 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 SEPT7P5-201ENST00000434048 306 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC241584.1-201ENST00000438469 1241 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 MTND2P20-201ENST00000440805 661 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 MTND1P30-201ENST00000441241 901 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 CDC27P1-201ENST00000445384 715 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC073909.1-201ENST00000447112 999 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 EIF4A1P6-201ENST00000448133 1210 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 RPL7P48-201ENST00000461513 746 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC090638.1-201ENST00000498296 909 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 CDC42P4-201ENST00000510507 563 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SMARCE1P4-201ENST00000523647 241 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC092354.1-201ENST00000606057 376 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 Z99129.1-201ENST00000612510 255 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC073534.2-201ENST00000620377 381 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 AC006840.1-201ENST00000623069 542 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CHAMP1Q96JM3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 GVINP1-202ENST00000531871 7271 ntBASIC6□□□□□ -1.45
CHAMP1Q96JM3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHAMP1Q96JM3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 PANDAR-201ENST00000629595 1506 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 AC000374.1-201ENST00000434698 1745 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 AC093311.1-201ENST00000506586 2021 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 AC131971.1-201ENST00000332881 1482 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 HMGB1P5-201ENST00000255320 642 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 RNU6-619P-201ENST00000365146 108 ntBASIC5.99□□□□□ -1.45
CHAMP1Q96JM3 RNA5SP223-201ENST00000365174 120 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms