RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
HMGB1P5-201ENST00000255320 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
HMGB1P5-201ENST00000255320 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
HMGB1P5-201ENST00000255320 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
HMGB1P5-201ENST00000255320 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
HMGB1P5-201ENST00000255320 FOXD1Q16676 465 aa14.92□□□□□ -0.02
HMGB1P5-201ENST00000255320 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
HMGB1P5-201ENST00000255320 ADRA2BP18089 450 aa14.68□□□□□ -0.06
HMGB1P5-201ENST00000255320 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
HMGB1P5-201ENST00000255320 KCNA4P22459 653 aa14.01□□□□□ -0.17
HMGB1P5-201ENST00000255320 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
HMGB1P5-201ENST00000255320 MSH5O43196 834 aa13.55□□□□□ -0.24
HMGB1P5-201ENST00000255320 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
HMGB1P5-201ENST00000255320 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
HMGB1P5-201ENST00000255320 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
HMGB1P5-201ENST00000255320 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
HMGB1P5-201ENST00000255320 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
HMGB1P5-201ENST00000255320 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
HMGB1P5-201ENST00000255320 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
HMGB1P5-201ENST00000255320 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
HMGB1P5-201ENST00000255320 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
HMGB1P5-201ENST00000255320 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P5-201ENST00000255320 ZBTB22O15209 634 aa12.95□□□□□ -0.34
HMGB1P5-201ENST00000255320 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
HMGB1P5-201ENST00000255320 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
HMGB1P5-201ENST00000255320 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
HMGB1P5-201ENST00000255320 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
HMGB1P5-201ENST00000255320 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P5-201ENST00000255320 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
HMGB1P5-201ENST00000255320 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
HMGB1P5-201ENST00000255320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
HMGB1P5-201ENST00000255320 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P5-201ENST00000255320 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
HMGB1P5-201ENST00000255320 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
HMGB1P5-201ENST00000255320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
HMGB1P5-201ENST00000255320 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
HMGB1P5-201ENST00000255320 FKBP8Q14318 412 aa11.84□□□□□ -0.51
HMGB1P5-201ENST00000255320 APLP2Q06481 763 aa11.75□□□□□ -0.53
HMGB1P5-201ENST00000255320 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
HMGB1P5-201ENST00000255320 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
HMGB1P5-201ENST00000255320 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
HMGB1P5-201ENST00000255320 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P5-201ENST00000255320 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P5-201ENST00000255320 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P5-201ENST00000255320 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
HMGB1P5-201ENST00000255320 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
HMGB1P5-201ENST00000255320 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P5-201ENST00000255320 CAPN15O75808 1086 aa11.5□□□□□ -0.57
HMGB1P5-201ENST00000255320 POLA2Q14181 598 aa11.47□□□□□ -0.57
HMGB1P5-201ENST00000255320 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
HMGB1P5-201ENST00000255320 FBLN2P98095 1184 aa11.41□□□□□ -0.58
HMGB1P5-201ENST00000255320 PROM2Q8N271 834 aa11.38□□□□□ -0.59
HMGB1P5-201ENST00000255320 ABCB7O75027 752 aa11.35□□□□□ -0.59
HMGB1P5-201ENST00000255320 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
HMGB1P5-201ENST00000255320 DSG3P32926 999 aa11.26□□□□□ -0.61
HMGB1P5-201ENST00000255320 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
HMGB1P5-201ENST00000255320 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
HMGB1P5-201ENST00000255320 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
HMGB1P5-201ENST00000255320 SLC24A1O60721 1099 aa11.08□□□□□ -0.64
HMGB1P5-201ENST00000255320 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
HMGB1P5-201ENST00000255320 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
HMGB1P5-201ENST00000255320 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
HMGB1P5-201ENST00000255320 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
HMGB1P5-201ENST00000255320 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
HMGB1P5-201ENST00000255320 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
HMGB1P5-201ENST00000255320 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
HMGB1P5-201ENST00000255320 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMGB1P5-201ENST00000255320 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
HMGB1P5-201ENST00000255320 PKD2Q13563 968 aa10.85□□□□□ -0.67
HMGB1P5-201ENST00000255320 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
HMGB1P5-201ENST00000255320 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
HMGB1P5-201ENST00000255320 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
HMGB1P5-201ENST00000255320 MIER1Q8N108 512 aa10.73□□□□□ -0.69
HMGB1P5-201ENST00000255320 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
HMGB1P5-201ENST00000255320 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
HMGB1P5-201ENST00000255320 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
HMGB1P5-201ENST00000255320 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
HMGB1P5-201ENST00000255320 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
HMGB1P5-201ENST00000255320 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P5-201ENST00000255320 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
HMGB1P5-201ENST00000255320 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
HMGB1P5-201ENST00000255320 RGL2O15211 777 aa10.58□□□□□ -0.72
HMGB1P5-201ENST00000255320 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P5-201ENST00000255320 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
HMGB1P5-201ENST00000255320 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGB1P5-201ENST00000255320 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
HMGB1P5-201ENST00000255320 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
HMGB1P5-201ENST00000255320 NUBP1P53384 320 aa10.5□□□□□ -0.73
HMGB1P5-201ENST00000255320 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P5-201ENST00000255320 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
HMGB1P5-201ENST00000255320 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P5-201ENST00000255320 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
HMGB1P5-201ENST00000255320 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P5-201ENST00000255320 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
HMGB1P5-201ENST00000255320 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P5-201ENST00000255320 GSE1Q14687 1217 aa10.43□□□□□ -0.74
HMGB1P5-201ENST00000255320 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
HMGB1P5-201ENST00000255320 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
HMGB1P5-201ENST00000255320 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
HMGB1P5-201ENST00000255320 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms