Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 AL121949.2-201ENST00000403446 1548 ntBASIC8.28□□□□□ -1.08
CD44P16070 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CD44P16070 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.28□□□□□ -1.08
CD44P16070 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.27□□□□□ -1.08
CD44P16070 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.27□□□□□ -1.08
CD44P16070 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.27□□□□□ -1.08
CD44P16070 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.27□□□□□ -1.08
CD44P16070 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 Y_RNA.369-201ENST00000365568 117 ntBASIC8.27□□□□□ -1.09
CD44P16070 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 RNU6-434P-201ENST00000384376 107 ntBASIC8.27□□□□□ -1.09
CD44P16070 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CD44P16070 RPS12P5-201ENST00000423449 371 ntBASIC8.27□□□□□ -1.09
CD44P16070 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.27□□□□□ -1.09
CD44P16070 VTI1BP4-201ENST00000427516 527 ntBASIC8.27□□□□□ -1.09
CD44P16070 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.27□□□□□ -1.09
CD44P16070 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.27□□□□□ -1.09
CD44P16070 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 AC093166.3-201ENST00000448785 303 ntBASIC8.27□□□□□ -1.09
CD44P16070 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.27□□□□□ -1.09
CD44P16070 RN7SL368P-201ENST00000473384 277 ntBASIC8.27□□□□□ -1.09
CD44P16070 RN7SL338P-201ENST00000481467 293 ntBASIC8.27□□□□□ -1.09
CD44P16070 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.27□□□□□ -1.09
CD44P16070 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 RNU6-685P-201ENST00000517088 95 ntBASIC8.27□□□□□ -1.09
CD44P16070 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 OR7E96P-201ENST00000530816 976 ntBASIC8.27□□□□□ -1.09
CD44P16070 AC007068.2-201ENST00000543168 395 ntBASIC8.27□□□□□ -1.09
CD44P16070 H3F3AP1-201ENST00000559984 334 ntBASIC8.27□□□□□ -1.09
CD44P16070 MIR3684-201ENST00000579779 74 ntBASIC8.27□□□□□ -1.09
CD44P16070 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.27□□□□□ -1.09
CD44P16070 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.27□□□□□ -1.09
CD44P16070 AL161616.1-201ENST00000611867 286 ntBASIC8.27□□□□□ -1.09
CD44P16070 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 AC097372.5-201ENST00000623665 376 ntBASIC8.27□□□□□ -1.09
CD44P16070 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 BX322650.1-201ENST00000332359 2143 ntBASIC8.27□□□□□ -1.09
CD44P16070 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 AC097063.1-201ENST00000426714 1797 ntBASIC8.27□□□□□ -1.09
CD44P16070 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CD44P16070 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.27□□□□□ -1.09
CD44P16070 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CD44P16070 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 AL034417.4-202ENST00000642135 2236 ntBASIC8.26□□□□□ -1.09
CD44P16070 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 RNU6-818P-201ENST00000364837 108 ntBASIC8.26□□□□□ -1.09
CD44P16070 RNU1-16P-201ENST00000365477 164 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC074375.1-201ENST00000372993 192 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC092952.1-201ENST00000397646 1209 ntBASIC8.26□□□□□ -1.09
CD44P16070 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 AC026254.1-201ENST00000479473 431 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC108078.2-201ENST00000510750 236 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.26□□□□□ -1.09
CD44P16070 RN7SKP96-201ENST00000516948 297 ntBASIC8.26□□□□□ -1.09
CD44P16070 Y_RNA.709-201ENST00000516952 92 ntBASIC8.26□□□□□ -1.09
CD44P16070 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 SAA3P-201ENST00000533267 365 ntBASIC8.26□□□□□ -1.09
CD44P16070 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.26□□□□□ -1.09
CD44P16070 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC8.26□□□□□ -1.09
CD44P16070 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.26□□□□□ -1.09
CD44P16070 AC008962.1-201ENST00000605729 304 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC023206.1-201ENST00000605824 298 ntBASIC8.26□□□□□ -1.09
CD44P16070 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 SNORA43.5-201ENST00000631270 138 ntBASIC8.26□□□□□ -1.09
CD44P16070 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms