Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MMP19-201ENST00000322569 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SMG1P3-205ENST00000522480 4262 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC25A44-201ENST00000359511 3482 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC004947.2-201ENST00000623092 2671 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF18-205ENST00000580613 2250 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL353625.1-201ENST00000569097 3131 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 GDNF-AS1-204ENST00000637595 1886 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SERPINA5-201ENST00000329597 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AK3-204ENST00000611749 4029 ntTSL 4 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 GMEB1-203ENST00000373816 6410 ntAPPRIS ALT1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 KIF23-207ENST00000559279 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC036108.4-201ENST00000611654 2516 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00598-207ENST00000616706 2088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 STIP1P3-201ENST00000394563 1624 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OR51H2P-202ENST00000641424 3046 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ACSL6-221ENST00000543479 2139 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKRD20A21P-202ENST00000623715 3588 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RSPH10B2-203ENST00000404077 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RSPH10B-202ENST00000404406 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AL669983.1-201ENST00000306634 318 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TAC4-201ENST00000326219 597 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OBP2A-201ENST00000340780 741 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SNORA63.2-201ENST00000362603 126 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-363P-201ENST00000362895 105 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SNORD115-39-201ENST00000363694 82 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 U3.46-201ENST00000365612 216 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-281P-201ENST00000384212 103 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR544A-201ENST00000384855 91 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 IGLV1-36-201ENST00000390301 393 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms