Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 DHX9P1-201ENST00000436565 3076 ntBASIC1.7□□□□□ -2.14
USH2AO75445 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 SAMMSON-213ENST00000641336 1521 ntBASIC1.7□□□□□ -2.14
USH2AO75445 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 SNORA5B-201ENST00000363786 132 ntBASIC1.7□□□□□ -2.14
USH2AO75445 FCF1P5-201ENST00000406490 482 ntBASIC1.7□□□□□ -2.14
USH2AO75445 MIR1911-201ENST00000410783 80 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RNU4-64P-201ENST00000410795 131 ntBASIC1.7□□□□□ -2.14
USH2AO75445 NPM1P11-201ENST00000417106 855 ntBASIC1.7□□□□□ -2.14
USH2AO75445 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 RPS3AP46-201ENST00000448352 682 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RBMY2UP-201ENST00000453474 324 ntBASIC1.7□□□□□ -2.14
USH2AO75445 DDX39BP2-208ENST00000453923 258 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RPS20P32-201ENST00000456044 356 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RPL31P50-201ENST00000471002 296 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AK5-208ENST00000478255 556 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 PRELID3BP3-201ENST00000584963 545 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC093732.2-201ENST00000607950 274 ntBASIC1.7□□□□□ -2.14
USH2AO75445 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC1.7□□□□□ -2.14
USH2AO75445 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC1.7□□□□□ -2.14
USH2AO75445 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 HMGB3P19-201ENST00000403971 560 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RPL6P21-201ENST00000418672 846 ntBASIC1.7□□□□□ -2.14
USH2AO75445 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 VN1R104P-201ENST00000505115 1009 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC019227.1-201ENST00000526902 510 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 AC006116.10-201ENST00000591836 581 ntBASIC1.7□□□□□ -2.14
USH2AO75445 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 AC025857.2-201ENST00000602711 238 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AL391497.1-201ENST00000608671 547 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC026422.1-201ENST00000623961 452 ntBASIC1.7□□□□□ -2.14
USH2AO75445 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
USH2AO75445 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 CA1-225ENST00000626824 2405 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 CCAT2-201ENST00000630920 1752 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AL136131.1-201ENST00000406079 803 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 AC005002.1-201ENST00000447458 540 ntBASIC1.7□□□□□ -2.14
USH2AO75445 UBE2V2P4-201ENST00000447495 259 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 AC073522.1-201ENST00000483312 377 ntBASIC1.7□□□□□ -2.14
USH2AO75445 RN7SL432P-201ENST00000484057 298 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC1.7□□□□□ -2.14
USH2AO75445 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
USH2AO75445 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 DDX18P5-201ENST00000534547 1306 ntBASIC1.7□□□□□ -2.14
USH2AO75445 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 ANKRD20A10P-201ENST00000457591 1515 ntBASIC1.7□□□□□ -2.14
USH2AO75445 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
USH2AO75445 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 TAF9BP1-201ENST00000396646 746 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC093698.1-201ENST00000423843 571 ntBASIC1.7□□□□□ -2.14
USH2AO75445 DNAJA1P1-201ENST00000425106 1187 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC006011.1-201ENST00000442758 349 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 RPL21P10-201ENST00000463521 490 ntBASIC1.7□□□□□ -2.14
USH2AO75445 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC1.7□□□□□ -2.14
USH2AO75445 AL034351.1-201ENST00000605288 668 ntBASIC1.7□□□□□ -2.14
USH2AO75445 AC124312.6-202ENST00000623624 418 ntBASIC1.7□□□□□ -2.14
USH2AO75445 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC1.7□□□□□ -2.14
USH2AO75445 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USH2AO75445 AC007823.1-201ENST00000569932 1566 ntBASIC1.69□□□□□ -2.14
USH2AO75445 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USH2AO75445 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
USH2AO75445 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC1.69□□□□□ -2.14
USH2AO75445 RPS3AP43-201ENST00000479743 781 ntBASIC1.69□□□□□ -2.14
USH2AO75445 RN7SKP248-201ENST00000516278 305 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms